RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FSTL3O95633 263 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 PLATP00750 562 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 IGHV2-70P01814 119 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 CD36P16671 472 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 EGR1P18146 543 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 SRMP19623 302 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 IL24Q13007 206 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 ZMYND11Q15326 602 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 CRIP3Q6Q6R5 217 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 RNF144BQ7Z419 303 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 RFT1Q96AA3 541 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 TCF7L1Q9HCS4 588 aa14.06□□□□□ -0.16
COMMD4-224ENST00000568877 TEX15Q9BXT5 2789 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 OTOGQ6ZRI0 2925 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 IGHV4-61A0A0C4DH41 118 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 ISPDA4D126 451 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 SRRM5B3KS81 715 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 NOS1APO75052 506 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-224ENST00000568877 MAS1P04201 325 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 ACAA1P09110 424 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-224ENST00000568877 USF1P22415 310 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-224ENST00000568877 CD80P33681 288 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 POU3F4P49335 361 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 PDZK1IP1Q13113 114 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 DDI2Q5TDH0 399 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 SFRP4Q6FHJ7 346 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-224ENST00000568877 SLC25A26Q70HW3 274 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 SATL1Q86VE3 508 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 LRRC28Q86X40 367 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-224ENST00000568877 MKXQ8IYA7 352 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 POC1AQ8NBT0 407 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 C19orf18Q8NEA5 215 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 SLITRK2Q9H156 845 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 TMEM165Q9HC07 324 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 STUB1Q9UNE7 303 aa14.05□□□□□ -0.16
COMMD4-224ENST00000568877 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 A0A096LNT2 108 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 MEGF11A6BM72 1044 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 OOEPA6NGQ2 149 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 LGALS8O00214 317 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 WNT9BO14905 357 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 CYB5AP00167 134 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 PGA5P0DJD9 388 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 CALRP27797 417 aaKnown RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 ZNF93P35789 620 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 MDH2P40926 338 aaKnown RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 ZP1P60852 638 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 GMFBP60983 142 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 TMEM155Q4W5P6 130 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 TEX36Q5VZQ5 186 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 LRRTM1Q86UE6 522 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 MUC20Q8N307 709 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 DEFB108BQ8NET1 73 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 OR5D18Q8NGL1 313 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 SLAMF9Q96A28 289 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 ZNF488Q96MN9 340 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 GPER1Q99527 375 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 NRIP2Q9BQI9 281 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 WDR13Q9H1Z4 485 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 OR51E2Q9H255 320 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 NARFLQ9H6Q4 476 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 EXOSC4Q9NPD3 245 aaKnown RBP14.04□□□□□ -0.16
COMMD4-224ENST00000568877 MTCH1Q9NZJ7 389 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 SSR3Q9UNL2 185 aa14.04□□□□□ -0.16
COMMD4-224ENST00000568877 TRAV38-1A0A0B4J264 116 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 H7C1Q1 480 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 SPRY1O43609 319 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 TMEM225BP0DP42 221 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 MUC1P15941 1255 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 ADRA2CP18825 462 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 GLRA1P23415 457 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 GADD45AP24522 165 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 FGF9P31371 208 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 LOXL1Q08397 574 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 ZNF404Q494X3 552 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 CDH26Q8IXH8 852 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 SAXO1Q8IYX7 474 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 NKAIN3Q8N8D7 197 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 ZSCAN4Q8NAM6 433 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 OR51F2Q8NH61 342 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 CLDND2Q8NHS1 167 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 YIPF6Q96EC8 236 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 CEP19Q96LK0 163 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 GAL3ST1Q99999 423 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 SNTG1Q9NSN8 517 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 TXNL4BQ9NX01 149 aaKnown RBP14.03□□□□□ -0.16
COMMD4-224ENST00000568877 RASL12Q9NYN1 266 aa14.03□□□□□ -0.16
COMMD4-224ENST00000568877 IGHV3OR15-7A0A075B7D8 119 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 ANGPTL7O43827 346 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 TFAP2AP05549 437 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 ERVK11-1P61568 191 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 KCNJ8Q15842 424 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 MICBQ29980 383 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 LYPD6Q86Y78 171 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 BATF2Q8N1L9 274 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 CIARTQ8N365 385 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-224ENST00000568877 SPICQ8N5J4 248 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms