RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SPIN2AQ99865 258 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SPIN2BQ9BPZ2 258 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ARGFXA6NJG6 315 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 HSD17B6O14756 317 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 IGHG1P01857 330 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 FAM157CP0CG43 387 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ZNF708P17019 499 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 CD200P41217 278 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 RPS16P62249 146 aaKnown RBP9.66□□□□□ -0.86
PALB2-206ENST00000568219 WDR25Q64LD2 544 aaPredicted RBP9.66□□□□□ -0.86
PALB2-206ENST00000568219 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 DDIT4LQ96D03 193 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 AQP10Q96PS8 301 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SMIM7Q9BQ49 75 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SOX7Q9BT81 388 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SAMD10Q9BYL1 202 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 TRGC1P0CF51 173 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 IL11P20809 199 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 UNC119Q13432 240 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 ARL6IP1Q15041 203 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 KHDC3LQ587J8 217 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 OR8G2PQ6IF36 304 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 OR13H1Q8NG92 308 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 ASB16Q96NS5 453 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 CLDN34H7C241 214 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 SNRNP200O75643 2136 aaKnown RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 DDAH2O95865 285 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 MT-ATP6P00846 226 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 IFNA1P01562 189 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 RPS23P62266 143 aaKnown RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 AQP3Q92482 292 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 CAPNS2Q96L46 248 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 GPR87Q9BY21 358 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 NECAP2Q9NVZ3 263 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 PILRAQ9UKJ1 303 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 TIMM8BQ9Y5J9 83 aaPredicted RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 KLF2Q9Y5W3 355 aaPredicted RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 POMT1Q9Y6A1 747 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 FTCDNL1E5RQL4 147 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 NPIPA2E9PIF3 369 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 NPIPA3F8WFD2 350 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 G3V3Y1 287 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 OR2J2O76002 312 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 CELA2BP08218 269 aaPredicted RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
PALB2-206ENST00000568219 HNF1AP20823 631 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 RPS4Y1P22090 263 aaKnown RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 PRAMEF20Q5VT98 475 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 EDARADDQ8WWZ3 215 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 MSL2Q9HCI7 577 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
PALB2-206ENST00000568219 ASXL3Q9C0F0 2248 aa9.65□□□□□ -0.86
PALB2-206ENST00000568219 HEATR5AQ86XA9 2040 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 TCRBV21S2A2A0A5A6 115 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 SLC31A2O15432 143 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 HBE1P02100 147 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 SNRPCP09234 159 aaKnown RBP9.65□□□□□ -0.87
PALB2-206ENST00000568219 ATP6V0CP27449 155 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 CLDN17P56750 224 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 HLA-DRB3P79483 266 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 EGR4Q05215 589 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 MALLQ13021 153 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 GRINAQ7Z429 371 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 OR2C3Q8N628 320 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 ZNF709Q8N972 641 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.87
PALB2-206ENST00000568219 KLHDC7BQ96G42 594 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 SLC46A1Q96NT5 459 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 METTL9Q9H1A3 318 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 LPAR5Q9H1C0 372 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 ZNF286AQ9HBT8 521 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 WBP1LQ9NX94 342 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 SLCO1B1Q9Y6L6 691 aa9.65□□□□□ -0.87
PALB2-206ENST00000568219 DIDO1Q9BTC0 2240 aaKnown RBP9.64□□□□□ -0.87
PALB2-206ENST00000568219 ZNF816-ZNF321PA0A0X1KG74 233 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 ASAH2BP0C7U1 165 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 IAPPP10997 89 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 MFAP5Q13361 173 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 PHF19Q5T6S3 580 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 SCN10AQ9Y5Y9 1956 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 MBPP02686 304 aaPredicted RBP9.64□□□□□ -0.87
PALB2-206ENST00000568219 TK1P04183 234 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 HOXA5P20719 270 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 FBLP22087 321 aaKnown RBP9.64□□□□□ -0.87
PALB2-206ENST00000568219 BLKP51451 505 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 FZD2Q14332 565 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 FHL5Q5TD97 284 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 SLC35G3Q8N808 338 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 OR11L1Q8NGX0 322 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms