RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 DTX3Q8N9I9 347 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 POC1AQ8NBT0 407 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 OR5AU1Q8NGC0 362 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 OTOSQ8NHW6 89 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 CMTM5Q96DZ9 223 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 OCSTAMPQ9BR26 566 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 OR14J1Q9UGF5 321 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 U3KQV3 271 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 HUWE1Q7Z6Z7 4374 aaKnown RBP12.44□□□□□ -0.42
PALB2-205ENST00000567003 DSCAML1Q8TD84 2053 aa12.44□□□□□ -0.42
PALB2-205ENST00000567003 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 PSMD9O00233 223 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 SLC1A7O00341 560 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 PF4P02776 101 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 FAHP16930 419 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 ATP6V1B2P21281 511 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
PALB2-205ENST00000567003 HCCSP53701 268 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 SMIM21Q3B7S5 101 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 CYP2R1Q6VVX0 501 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 FOXRED1Q96CU9 486 aaPredicted RBP12.43□□□□□ -0.42
PALB2-205ENST00000567003 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 TBL2Q9Y4P3 447 aaKnown RBP12.43□□□□□ -0.42
PALB2-205ENST00000567003 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
PALB2-205ENST00000567003 hCG_1809904A0A1W2PP81 198 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 A0A1W2PPE2 198 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 A0A1W2PR64 198 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 A0A1W2PRV1 198 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 C17orf98A8MV24 154 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 F2RL2O00254 374 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 PGA5P0DJD9 388 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 MAP2K3P46734 347 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 DYNC1I2Q13409 638 aaKnown RBP12.42□□□□□ -0.42
PALB2-205ENST00000567003 ZNF626Q68DY1 528 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 PLBD1Q6P4A8 553 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 C10orf99Q6UWK7 81 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 TRPM8Q7Z2W7 1104 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 OR5A2Q8NGI9 324 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 OR8B4Q96RC9 309 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 NIPSNAP1Q9BPW8 284 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 DGCR6LQ9BY27 220 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 RASL12Q9NYN1 266 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
PALB2-205ENST00000567003 TCRBV4S1A1TA0A5B7 111 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 OR5B21A6NL26 309 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 NXPH2O95156 264 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 TK1P04183 234 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 PRDX6P30041 224 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 HAAOP46952 286 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 SLC35A2P78381 396 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 CD69Q07108 199 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 TCF23Q7RTU1 214 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 BBS1Q8NFJ9 593 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 OR13D1Q8NGV5 346 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 TEX47Q8TBZ9 253 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 OR51E1Q8TCB6 317 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 MALSU1Q96EH3 234 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 TTTY10Q9BZA0 68 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 GPR173Q9NS66 373 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 ARGLU1Q9NWB6 273 aaPredicted RBP12.41□□□□□ -0.42
PALB2-205ENST00000567003 FAM206AQ9NX38 181 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 PIGLQ9Y2B2 252 aa12.41□□□□□ -0.42
PALB2-205ENST00000567003 SAMHD1Q9Y3Z3 626 aaKnown RBP12.41□□□□□ -0.42
PALB2-205ENST00000567003 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
PALB2-205ENST00000567003 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 J3QT63 122 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 CD24P25063 80 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 MAGEA2P43356 314 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 MICAQ29983 383 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 KRT74Q7RTS7 529 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 KRT77Q7Z794 578 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 PGAM4Q8N0Y7 254 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.42
PALB2-205ENST00000567003 MYDGFQ969H8 173 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 WWC2-AS2Q96NR7 200 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 TEAD3Q99594 435 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
PALB2-205ENST00000567003 PBOV1Q9GZY1 135 aa12.4□□□□□ -0.42
PALB2-205ENST00000567003 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 H3BN98 237 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 ZNF728P0DKX0 622 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 IGHV1-8P0DP01 117 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 EDDM3BP56851 147 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 OR12D2P58182 307 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 COL10A1Q03692 680 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
PALB2-205ENST00000567003 RIPPLY1Q0D2K3 151 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 KHDC1LQ5JSQ8 128 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 ZNF684Q5T5D7 378 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms