RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CAPZA1P52907 286 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 CRISP1P54107 249 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
RNF40-209ENST00000566703 LRRC75BQ2VPJ9 315 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 PLCXD3Q63HM9 321 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 TMEM42Q69YG0 159 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 Q6ZSR3 168 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 COMMD2Q86X83 199 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 HS3ST5Q8IZT8 346 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 C11orf42Q8N5U0 333 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 CD177Q8N6Q3 437 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 FAM110DQ8TAY7 271 aaPredicted RBP12.2□□□□□ -0.46
RNF40-209ENST00000566703 MOB1AQ9H8S9 216 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 ELL3Q9HB65 397 aaPredicted RBP12.2□□□□□ -0.46
RNF40-209ENST00000566703 C19orf12Q9NSK7 152 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 CCDC182A6NF36 153 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 J3QT63 122 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 SLC1A7O00341 560 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 FKBP6O75344 327 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 TTRP02766 147 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 PGA5P0DJD9 388 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 FAHP16930 419 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 ESRRGP62508 458 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 CBX1P83916 185 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 OR2T27Q8NH04 317 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 C17orf50Q8WW18 174 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 CFHR4Q92496 578 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 PPP1R14AQ96A00 147 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 PRRG3Q9BZD7 231 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 PAPOLBQ9NRJ5 636 aaKnown RBP12.19□□□□□ -0.46
RNF40-209ENST00000566703 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 IKZF2Q9UKS7 526 aa12.19□□□□□ -0.46
RNF40-209ENST00000566703 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.19□□□□□ -0.46
RNF40-209ENST00000566703 TCRBV3S1A0A5B6 114 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 PQLC2LA1A4F0 135 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 FAM90A8PA6NJQ4 464 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 DHRS7CA6NNS2 312 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 LOC110117498-PIK3R3F6TDL0 507 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 SRSF10O75494 262 aaKnown RBP12.18□□□□□ -0.46
RNF40-209ENST00000566703 MPZP25189 248 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 HAAOP46952 286 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 LGALS4P56470 323 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 MEPCEQ7L2J0 689 aaKnown RBP12.18□□□□□ -0.46
RNF40-209ENST00000566703 SPATA24Q86W54 205 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 ELMOD2Q8IZ81 293 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 RORBQ92753 470 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 CNN2Q99439 309 aaKnown RBP12.18□□□□□ -0.46
RNF40-209ENST00000566703 NRIP2Q9BQI9 281 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 NPFFR1Q9GZQ6 430 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 H2AFY2Q9P0M6 372 aaPredicted RBP12.18□□□□□ -0.46
RNF40-209ENST00000566703 COPS3Q9UNS2 423 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 V9GYS6 101 aa12.18□□□□□ -0.46
RNF40-209ENST00000566703 A0A1B0GTI1 187 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 VGLL3A8MV65 326 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 PRR32B1ATL7 298 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 SYNGR1O43759 233 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 NXPH2O95156 264 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 OPN1MWP04001 364 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 TK1P04183 234 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 MRPL3P09001 348 aaKnown RBP12.17□□□□□ -0.46
RNF40-209ENST00000566703 OPN1MW2P0DN77 364 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 OPN1MW3P0DN78 364 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 EFNB1P98172 346 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 FLOT2Q14254 428 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 PTGES3Q15185 160 aaKnown RBP12.17□□□□□ -0.46
RNF40-209ENST00000566703 LY6EQ16553 131 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 FAHD1Q6P587 224 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 ZNF322Q6U7Q0 402 aaPredicted RBP12.17□□□□□ -0.46
RNF40-209ENST00000566703 OR14K1Q8NGZ2 314 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 HES4Q9HCC6 221 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 OR52A1Q9UKL2 312 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 R4GMQ9 66 aa12.17□□□□□ -0.46
RNF40-209ENST00000566703 C17orf98A8MV24 154 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 K7N7A8 449 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 GYG2O15488 501 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 PRKYO43930 277 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 RBP4P02753 201 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 DAPP51397 102 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 ERVK11-1P61568 191 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 MFGE8Q08431 387 aaPredicted RBP12.16□□□□□ -0.46
RNF40-209ENST00000566703 IL24Q13007 206 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 AADACL4Q5VUY2 407 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 NXNL2Q5VZ03 156 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 OR4M1Q8NGD0 313 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 MALSU1Q96EH3 234 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 APOL4Q9BPW4 351 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms