RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 HNRNPA1L2Q32P51 320 aaKnown RBP2.29□□□□□ -2.04
CHD9-215ENST00000565442 CAVIN4Q5BKX8 364 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 TTC32Q5I0X7 151 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 ZNF678Q5SXM1 525 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 MORN3Q6PF18 240 aaPredicted RBP2.29□□□□□ -2.04
CHD9-215ENST00000565442 C16orf87Q6PH81 154 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 FAM131AQ6UXB0 335 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 ASCC1Q8N9N2 400 aaKnown RBP2.29□□□□□ -2.04
CHD9-215ENST00000565442 ZNF680Q8NEM1 530 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 OR52K1Q8NGK4 314 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 ZFAND1Q8TCF1 268 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 DERL3Q96Q80 235 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 UTP23Q9BRU9 249 aaKnown RBP2.29□□□□□ -2.04
CHD9-215ENST00000565442 PORCNQ9H237 461 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 LHX5Q9H2C1 402 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 RAB23Q9ULC3 237 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 V9GYY9 64 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 LOXHD1Q8IVV2 1947 aa2.29□□□□□ -2.04
CHD9-215ENST00000565442 AQRO60306 1485 aaKnown RBP eCLIP2.28□□□□□ -2.04
CHD9-215ENST00000565442 RPRD2Q5VT52 1461 aaKnown RBP2.28□□□□□ -2.04
CHD9-215ENST00000565442 NPHP4O75161 1426 aaPredicted RBP2.28□□□□□ -2.04
CHD9-215ENST00000565442 ELP1O95163 1332 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SHANK1Q9Y566 2161 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TRAV8-7A0A075B6U6 113 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 A0A0J9YYE9 177 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TVP23AA6NH52 213 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SEC14L6B5MCN3 397 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 ALOX12BO75342 701 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 DHRS3O75911 302 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TRBC1P01850 177 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 IGLV7-43P04211 117 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 RHOCP08134 193 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 OR5AL1P0C617 328 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SEC11BP0C7V7 166 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 HLA-GP17693 338 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 HTR2CP28335 458 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 ATP5J2P56134 94 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 CARD18P57730 90 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
CHD9-215ENST00000565442 IL5RAQ01344 420 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TAL2Q16559 108 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 FBXL19-AS1Q494R0 122 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SLC25A25Q6KCM7 469 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 ITPRIPQ8IWB1 547 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 LINC00304Q8N9R0 145 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SHANK2-AS3Q9BTD1 123 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TMED9Q9BVK6 235 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 ANGPTL4Q9BY76 406 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 TM6SF2Q9BZW4 377 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 ANKHQ9HCJ1 492 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
CHD9-215ENST00000565442 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.05
CHD9-215ENST00000565442 ANKRD20A5PA0PJZ0 165 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 K7EN84 100 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 RFXANKO14593 260 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 NRASP01111 189 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 HRASP01112 189 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 KRASP01116 189 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 IGKV1D-16P01601 117 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 LIPCP11150 499 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 ARR3P36575 388 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 TGM4P49221 684 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 RGS6P49758 472 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 RPL10AP62906 217 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 PRKCDQ05655 676 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 ATP5G2Q06055 141 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 DYNC1I2Q13409 638 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 IGFBP7Q16270 282 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 CDNFQ49AH0 187 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 PRNTQ86SH4 94 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 SETD3Q86TU7 594 aaPredicted RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 LRRC8AQ8IWT6 810 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 RNF10Q8N5U6 811 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 SLC26A10Q8NG04 563 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 OR13C9Q8NGT0 318 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 FAM57AQ8TBR7 257 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 NT5CQ8TCD5 201 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 MITD1Q8WV92 249 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 CACNG8Q8WXS5 425 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 METTL26Q96S19 204 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 ZNF649Q9BS31 505 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 MAP1LC3CQ9BXW4 147 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 BEX2Q9BXY8 128 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 MRPL20Q9BYC9 149 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 COA1Q9GZY4 146 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 DDIT4Q9NX09 232 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 STX18Q9P2W9 335 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 TFR2Q9UP52 801 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 SLC7A11Q9UPY5 501 aa2.27□□□□□ -2.05
CHD9-215ENST00000565442 BZW2Q9Y6E2 419 aaKnown RBP2.27□□□□□ -2.05
CHD9-215ENST00000565442 SETD1AO15047 1707 aaKnown RBP2.26□□□□□ -2.05
CHD9-215ENST00000565442 OR6C70A6NIJ9 312 aa2.26□□□□□ -2.05
CHD9-215ENST00000565442 VGLL3A8MV65 326 aa2.26□□□□□ -2.05
CHD9-215ENST00000565442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms