RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 NFAT5O94916 1531 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 KIF1AQ12756 1690 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 ALS2Q96Q42 1657 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 LRP5O75197 1615 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 A0A0A6YYD5 115 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 SERTM2A0A1B0GWG4 89 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 ISPDA4D126 451 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 CENPBD1B2RD01 187 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 SLC16A7O60669 478 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 SCELO95171 688 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 TRBV12-3P01733 135 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 GALP22466 123 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 STOMP27105 288 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 C6orf99Q4VX62 202 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 PYDC2Q56P42 97 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 TWF2Q6IBS0 349 aaKnown RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 EDC4Q6P2E9 1401 aaKnown RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 METAP1DQ6UB28 335 aaPredicted RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 NT5DC3Q86UY8 548 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 ORMDL3Q8N138 153 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 SLC25A29Q8N8R3 303 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 SLC26A10Q8NG04 563 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 OR56A4Q8NGH8 313 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 OR52K2Q8NGK3 314 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 OR52N1Q8NH53 320 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 AGR3Q8TD06 166 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 RAB1CQ92928 201 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 GSDMAQ96QA5 445 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 CALN1Q9BXU9 219 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 NSD3Q9BZ95 1437 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 GEMIN7Q9H840 131 aaKnown RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 TAS2R1Q9NYW7 299 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 CAB39Q9Y376 341 aaPredicted RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 ZSWIM8A7E2V4 1837 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 THSD7AQ9UPZ6 1657 aa1.7□□□□□ -2.14
PALB2-203ENST00000565038 COL14A1Q05707 1796 aaKnown RBP1.7□□□□□ -2.14
PALB2-203ENST00000565038 NRAPQ86VF7 1730 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 KDM6AO15550 1401 aaPredicted RBP1.69□□□□□ -2.14
PALB2-203ENST00000565038 LRRIQ4A6NIV6 560 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 A8MWL6 223 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 KRT14P02533 472 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 ANXA8P13928 327 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 HMOX2P30519 316 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 TGFBR2P37173 567 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 NBL1P41271 181 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 TNFRSF9Q07011 255 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 BIKQ13323 160 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 IL18Q14116 193 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 WDR43Q15061 677 aaKnown RBP eCLIP1.69□□□□□ -2.14
PALB2-203ENST00000565038 ANXA8L1Q5VT79 327 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 MFSD14CQ5VZR4 134 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 CLEC2AQ6UVW9 174 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 LINC00336Q6ZUF6 198 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 USP50Q70EL3 339 aaPredicted RBP1.69□□□□□ -2.14
PALB2-203ENST00000565038 BZW1Q7L1Q6 419 aaKnown RBP1.69□□□□□ -2.14
PALB2-203ENST00000565038 SCD5Q86SK9 330 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 BBS7Q8IWZ6 715 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 OFCC1Q8IZS5 231 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 VKORC1L1Q8N0U8 176 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 OR4M2Q8NGB6 313 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 OR52E5Q8NH55 327 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 TMEM159Q96B96 161 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 S100PBPQ96BU1 408 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 PKMYT1Q99640 499 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 TRIM45Q9H8W5 580 aaPredicted RBP1.69□□□□□ -2.14
PALB2-203ENST00000565038 CLN8Q9UBY8 286 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 PLCH1Q4KWH8 1693 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 LMO7Q8WWI1 1683 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 FLT4P35916 1363 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 PEAK1Q9H792 1746 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 IFT172Q9UG01 1749 aa1.69□□□□□ -2.14
PALB2-203ENST00000565038 MROH7Q68CQ1 1323 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 WDR19Q8NEZ3 1342 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 USP42Q9H9J4 1324 aaKnown RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 ADGRB2O60241 1585 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 NRKQ7Z2Y5 1582 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 PIK3C2AO00443 1686 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 RGPD5Q99666 1765 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 KCPQ6ZWJ8 1503 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 CCL15-CCL14A0A0B4J2E2 113 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 KBTBD11-OT1A0A1B0GTJ5 212 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 SUPT3HB4E1H0 165 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 CASQ2O14958 399 aaPredicted RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 FSTL3O95633 263 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 MAS1P04201 325 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 ERCC1P07992 297 aaPredicted RBP1.68□□□□□ -2.14
PALB2-203ENST00000565038 RAB5AP20339 215 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 HLA-DMAP28067 261 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 SLC1A2P43004 574 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 TGM4P49221 684 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 PPP1CAP62136 330 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 CCL15Q16663 113 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 TMEM236Q5W0B7 351 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 CST9Q5W186 159 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 KDM4DQ6B0I6 523 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 TMEM53Q6P2H8 277 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 WDR59Q6PJI9 974 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 COPS6Q7L5N1 327 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 GABRG1Q8N1C3 465 aa1.68□□□□□ -2.14
PALB2-203ENST00000565038 JAGN1Q8N5M9 183 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms