RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 IGKV6-21A0A0C4DH24 114 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 F8VVB4 439 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 F8VWA3 439 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 G3V3Y1 287 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZFPL1O95159 310 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 CCR2P41597 374 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZNF684Q5T5D7 378 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 OR11L1Q8NGX0 322 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZNF764Q96H86 408 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 C5AR2Q9P296 337 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SOX21Q9Y651 276 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 EOMESO95936 686 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 FTH1P19P0C7X4 201 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 CST9Q5W186 159 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ASTLQ6HA08 431 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 TMEM136Q6ZRR5 245 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 GPBAR1Q8TDU6 330 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SGCZQ96LD1 299 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MEGF9Q9H1U4 602 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 CGGBP1Q9UFW8 167 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 OTOFQ9HC10 1997 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 BMPR1BO00238 502 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 COCHO43405 550 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ESDP10768 282 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PFN3P60673 137 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 HES1Q14469 280 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 OCIAD2Q56VL3 154 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 NUDT22Q9BRQ3 303 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 LOC102725191A0A1B0GVB3 256 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 C1orf105O95561 183 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 IGHG1P01857 330 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SCGB1C2P0DMR2 95 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZBTB25P24278 435 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MC5RP33032 325 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 LTC4SQ16873 150 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MRPL24Q96A35 216 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 FAM71F1Q96KD3 344 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 TSPAN32Q96QS1 320 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 LPAR5Q9H1C0 372 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 A0A1W2PRS3 328 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TMEM250H0YL14 139 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SNCGO76070 127 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 NTSR1P30989 418 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 RBM45Q8IUH3 476 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 C17orf47Q8NEP4 570 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 OR13G1Q8NGZ3 307 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PFN4Q8NHR9 129 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TOX2Q96NM4 488 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MENTQ9BUN1 341 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PARLQ9H300 379 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 A0A1B0GWA3 101 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SLCO2B1O94956 709 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 SNAI1O95863 264 aaPredicted RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 PPP2CBP62714 309 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PPP2CAP67775 309 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 PLGLB1Q02325 96 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 ZNF117Q03924 483 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TMEM255AQ5JRV8 349 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TPGS2Q68CL5 300 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 CPEB2Q7Z5Q1 589 aaKnown RBP5.61□□□□□ -1.51
CLK3-212ENST00000563418 AMER3Q8N944 861 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TMEM170AQ8WVE7 144 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 MBD3L1Q8WWY6 194 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 RBKSQ9H477 322 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 HSF4Q9ULV5 492 aa5.61□□□□□ -1.51
CLK3-212ENST00000563418 TMEM262E9PQX1 116 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 APCSP02743 223 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 HOXA11P31270 313 aaPredicted RBP5.6□□□□□ -1.51
CLK3-212ENST00000563418 GZMMP51124 257 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 DMBX1Q8NFW5 382 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 OR2A1Q8NGT9 310 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 ZNF480Q8WV37 535 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 DPRXA6NFQ7 191 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 TGM5O43548 720 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 SLC2A10O95528 541 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 OR4Q2P0C623 313 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 HIST1H1DP16402 221 aaKnown RBP5.6□□□□□ -1.51
CLK3-212ENST00000563418 HOXC12P31275 282 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 INSL4Q14641 139 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 VAX1Q5SQQ9 334 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 SPNS2Q8IVW8 549 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 POC1AQ8NBT0 407 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 MS4A8Q9BY19 250 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 TMEM106BQ9NUM4 274 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 COL24A1Q17RW2 1714 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 A0A087WUJ7 227 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 IGKV6D-21A0A0A0MT36 114 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 IGHV1-69-2A0A0G2JMI3 117 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 NPIPB15A6NHN6 443 aaPredicted RBP5.6□□□□□ -1.51
CLK3-212ENST00000563418 LSM11P83369 360 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLK3-212ENST00000563418 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLK3-212ENST00000563418 MFSD12Q6NUT3 480 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 SPACA7Q96KW9 195 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 GLIPR2Q9H4G4 154 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 IDSB3KWA1 339 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 FCGR2AP12318 317 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 FCER1GP30273 86 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 ADCYAP1R1P41586 468 aa5.6□□□□□ -1.51
CLK3-212ENST00000563418 SEC11AP67812 179 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms