RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CHRFAM7AQ494W8 412 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 CCDC58Q4VC31 144 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ESCO2Q56NI9 601 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ATPAF1Q5TC12 328 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 RNLSQ5VYX0 342 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 WDR25Q64LD2 544 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 DMKNQ6E0U4 476 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 FAHD2BQ6P2I3 314 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 RPL22L1Q6P5R6 122 aaKnown RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 TMPRSS11AQ6ZMR5 421 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 AHSA2Q719I0 299 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ZNF676Q8N7Q3 588 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 NANOGP1Q8N7R0 232 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 POC1AQ8NBT0 407 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 OR5T2Q8NGG2 359 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 OR8B3Q8NGG8 313 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 OR5AK2Q8NH90 309 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ANGPTL6Q8NI99 470 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 TRMT10AQ8TBZ6 339 aaKnown RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 NPRL2Q8WTW4 380 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 PP6455Q8WZ26 134 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 C12orf43Q96C57 262 aaKnown RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 FAHD2AQ96GK7 314 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 OR8B2Q96RD0 313 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 MYCBPQ99417 103 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 CCL13Q99616 98 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 SSBP3Q9BWW4 388 aaPredicted RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 BEX2Q9BXY8 128 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 SHARPINQ9H0F6 387 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 DUSP21Q9H596 190 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 PLEKHA1Q9HB21 404 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 SNTG1Q9NSN8 517 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 LPAR3Q9UBY5 353 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ZNF222Q9UK12 451 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 RRP15Q9Y3B9 282 aaKnown RBP7.1□□□□□ -1.27
UBR1-204ENST00000563239 INSIG2Q9Y5U4 225 aa7.1□□□□□ -1.27
UBR1-204ENST00000563239 ATRQ13535 2644 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 IGKV1D-17A0A075B6S4 117 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 LOC105371242A0A075B767 164 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 A0A0G2JMP0 313 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 A0A0X1KG70 313 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 FAM230AA0A1W2PPH8 454 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PTGES3LE9PB15 166 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 J3QLI3 93 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 DVL1O14640 695 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 NDUFA2O43678 99 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 GATBO75879 557 aaKnown RBP7.09□□□□□ -1.27
UBR1-204ENST00000563239 FSHBP01225 129 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 MT-ND2P03891 347 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 CDK1P06493 297 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 FAM157CP0CG43 387 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PSG2P11465 335 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 SELLP14151 372 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 FUT6P51993 359 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 RPS11P62280 158 aaKnown RBP eCLIP7.09□□□□□ -1.27
UBR1-204ENST00000563239 GNB2P62879 340 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 SLC35A2P78381 396 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PAX8Q06710 450 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 IRF3Q14653 427 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 KCNJ8Q15842 424 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 MICBQ29980 383 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 DCAF12L2Q5VW00 463 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ZNF529Q6P280 563 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ZNF788Q6ZQV5 615 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ZNF573Q86YE8 665 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 STX19Q8N4C7 294 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PARP16Q8N5Y8 322 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 CD177Q8N6Q3 437 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 FAM216BQ8N7L0 139 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ZFP41Q8N8Y5 198 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 DNAAF1Q8NEP3 725 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 OR4M2Q8NGB6 313 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 OR13C3Q8NGS6 347 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 OR13C5Q8NGS8 318 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 ZNF671Q8TAW3 534 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 HAVCR2Q8TDQ0 301 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 GHSRQ92847 366 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 SMIM19Q96E16 107 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PGLYRP3Q96LB9 341 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 TECTBQ96PL2 329 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 GAFA1Q96PS6 74 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 NRIP2Q9BQI9 281 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 CDCA4Q9BXL8 241 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 PKIBQ9C010 78 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 VCX3BQ9H321 246 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 HES4Q9HCC6 221 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 TRIM36Q9NQ86 728 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 MTCH1Q9NZJ7 389 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 CLN8Q9UBY8 286 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 SLC7A11Q9UPY5 501 aa7.09□□□□□ -1.27
UBR1-204ENST00000563239 LSM2Q9Y333 95 aaKnown RBP7.09□□□□□ -1.27
UBR1-204ENST00000563239 IGHV2-70DA0A0C4DH43 119 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 TRBV5-5A0A0J9YX44 114 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 KIR2DS1A0A191URI9 304 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 OR2AT4A6NND4 320 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 ALX3O95076 343 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 SERPINA3P01011 423 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 ZNF20P17024 532 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms