RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ZNF732B4DXR9 585 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 M0R1B8 84 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 SCGNO76038 276 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 CA6P23280 308 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 CA7P43166 264 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 SNTB2Q13425 540 aaKnown RBP15.46■□□□□ 0.06
COMMD4-208ENST00000563220 IGFBP7Q16270 282 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 PXT1Q8NFP0 134 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 OR5A2Q8NGI9 324 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 CAPSLQ8WWF8 208 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 MPC1Q9Y5U8 109 aa15.46■□□□□ 0.06
COMMD4-208ENST00000563220 SULT1C2O00338 296 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 HTR3BO95264 441 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 ECDO95905 644 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-208ENST00000563220 MT-ND4P03905 459 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 MELTFP08582 738 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 RSU1Q15404 277 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 PLA1AQ53H76 456 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 OR51F2Q8NH61 342 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 HIST1H2AAQ96QV6 131 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 MARVELD1Q9BSK0 173 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 TM2D1Q9BX74 207 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 HRASLSQ9HDD0 168 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 KCNK7Q9Y2U2 307 aa15.45■□□□□ 0.06
COMMD4-208ENST00000563220 FOXI3A8MTJ6 420 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-208ENST00000563220 C16orf97H3BN30 126 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 FCER2P06734 321 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 SFTPBP07988 381 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 SEZ6L2Q6UXD5 910 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 ZNF611Q8N823 705 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 OR56B1Q8NGI3 324 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 BCL2L14Q9BZR8 327 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 POLEQ07864 2286 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 IQCF6A8MYZ5 107 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 LPLP06858 475 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 HAAOP46952 286 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 CASP6P55212 293 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 FAM189A2Q15884 450 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 PCGF3Q3KNV8 242 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 C3orf36Q3SXR2 165 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 OLFML2AQ68BL7 652 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 SLC25A26Q70HW3 274 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 TCTE3Q8IZS6 198 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 RAB3CQ96E17 227 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 Q96M66 194 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 C7orf50Q9BRJ6 194 aaKnown RBP15.44■□□□□ 0.06
COMMD4-208ENST00000563220 SCPEP1Q9HB40 452 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 OSGIN2Q9Y236 505 aa15.44■□□□□ 0.06
COMMD4-208ENST00000563220 CSTBP04080 98 aaKnown RBP15.43■□□□□ 0.06
COMMD4-208ENST00000563220 AP3S2P59780 193 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 UNQ6126/PRO20091Q6UXV3 157 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 FJX1Q86VR8 437 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 ZSCAN4Q8NAM6 433 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-208ENST00000563220 UPRTQ96BW1 309 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 ARHGAP5-AS1Q96IT6 56 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 TRAF4Q9BUZ4 470 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-208ENST00000563220 IL36GQ9NZH8 169 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 FZR1Q9UM11 496 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 SHANK1Q9Y566 2161 aa15.43■□□□□ 0.06
COMMD4-208ENST00000563220 ITPR1Q14643 2758 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 TPRP12270 2363 aaKnown RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 ERVH48-1M5A8F1 160 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 ZNF780AO75290 641 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 GTF2F2P13984 249 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 HIST1H1DP16402 221 aaKnown RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 TUBG1P23258 451 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 GIFP27352 417 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 BLVRBP30043 206 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 NPBWR2P48146 333 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 FABP6P51161 128 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 TATDN3Q17R31 274 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 FAAP20Q6NZ36 180 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 NUDCD2Q8WVJ2 157 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 TUBG2Q9NRH3 451 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 PURGQ9UJV8 347 aaKnown RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 SELEP16581 610 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 S100A1P23297 94 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 CPT2P23786 658 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 CCR6P51684 374 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 BTG1P62324 171 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 CDK10Q15131 360 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 MSMPQ1L6U9 139 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 SFRP4Q6FHJ7 346 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-208ENST00000563220 BATF2Q8N1L9 274 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 CREB3L1Q96BA8 519 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 ZNF581Q9P0T4 197 aa15.42■□□□□ 0.06
COMMD4-208ENST00000563220 CCL21O00585 134 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 MFNGO00587 321 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 SSX5O60225 188 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 CSF1P09603 554 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 GABRR1P24046 479 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 GNG3P63215 75 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 SSBP1Q04837 148 aaKnown RBP15.41■□□□□ 0.06
COMMD4-208ENST00000563220 TAF9Q16594 264 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 ZNF718Q3SXZ3 478 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 C1QTNF12Q5T7M4 302 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 SIGIRRQ6IA17 410 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 NOXA1Q86UR1 476 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 OSR2Q8N2R0 312 aa15.41■□□□□ 0.06
COMMD4-208ENST00000563220 SLAMF9Q96A28 289 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms