RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF264O43296 627 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 LMO1P25800 156 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 RPL29P47914 159 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 GLO1Q04760 184 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 TMEM156Q8N614 296 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 THRSPQ92748 146 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 SLC25A44Q96H78 314 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 RCC1LQ96I51 464 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 RCL1Q9Y2P8 373 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 CDRT15L2A8MXV6 281 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 TP53I11O14683 189 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 TGOLN2O43493 480 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 NUDT21O43809 227 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF774Q6NX45 483 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF321PQ8N8H1 164 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 TVP23CQ96ET8 276 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 SYT3Q9BQG1 590 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 SEMA5BQ9P283 1151 aa12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 STRAPQ9Y3F4 350 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-203ENST00000562609 BORCS7-ASMTA0A0B4J1R7 106 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 GABRR1P24046 479 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 APOBEC1P41238 236 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 SLC25A1P53007 311 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 TMEM182Q6ZP80 229 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 OR4C3Q8NH37 302 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 ASB5Q8WWX0 329 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 NIPSNAP3BQ9BS92 247 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 CEP192Q8TEP8 1941 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 A0A1B0GW64 132 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 DEDDO75618 318 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 NKX2-2O95096 273 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 SCGB1D2O95969 90 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 EGR3Q06889 387 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 ZNF283Q8N7M2 679 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 DGAT2Q96PD7 388 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 SUSD2Q9UGT4 822 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 PADI1Q9ULC6 663 aa12.36□□□□□ -0.43
GTF3C1-203ENST00000562609 DHRS7CA6NNS2 312 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 CA11O75493 328 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 CRTAPO75718 401 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 PNPP00491 289 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 TK1P04183 234 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 FUT3P21217 361 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 RND3P61587 244 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 SQSTM1Q13501 440 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 POMZP3Q6PJE2 187 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 KIRREL2Q6UWL6 708 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 SLC35D2Q76EJ3 337 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 OR1P1Q8NH06 330 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 SMDT1Q9H4I9 107 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 OR52A1Q9UKL2 312 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 TBPP20226 339 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 EPHA1P21709 976 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 GLRA1P23415 457 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 PRPS1P60891 318 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 MEP1BQ16820 701 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 NKAIN1Q4KMZ8 207 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 HLA-CQ95604 372 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 VSTM2LQ96N03 204 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 LPAR4Q99677 370 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 FAAP24Q9BTP7 215 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 PNO1Q9NRX1 252 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-203ENST00000562609 TCF21O43680 179 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 H3F3AP84243 136 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 PCK2Q16822 640 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 CT45A2Q5DJT8 189 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 V9GYS6 101 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 CELSR3Q9NYQ7 3312 aa12.34□□□□□ -0.43
GTF3C1-203ENST00000562609 CDC14CA4D256 554 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms