RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 BBS1Q8NFJ9 593 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 OR5K1Q8NHB7 308 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 NDNFQ8TB73 568 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 OR51E1Q8TCB6 317 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 SDSLQ96GA7 329 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 OCSTAMPQ9BR26 566 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 ZNF649Q9BS31 505 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 SPAG4Q9NPE6 437 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 USE1Q9NZ43 259 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 GTF2A1LQ9UNN4 478 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 PCDHGB5Q9Y5G0 923 aa9.36□□□□□ -0.91
NSMCE1-202ENST00000561960 STAB2Q8WWQ8 2551 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ODF3BA8MYP8 253 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 PRR32B1ATL7 298 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 MAGEB4O15481 346 aaPredicted RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 NXPH2O95156 264 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 LYNP07948 512 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ZNF3P17036 446 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 CFL1P23528 166 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 HAAOP46952 286 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 SNU13P55769 128 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ESRRGP62508 458 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 GNG3P63215 75 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 CD83Q01151 205 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 COL10A1Q03692 680 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 MFGE8Q08431 387 aaPredicted RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 AANATQ16613 207 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 SAMD4BQ5PRF9 694 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ZNF770Q6IQ21 691 aaPredicted RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 PLBD1Q6P4A8 553 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 PLEKHG7Q6ZR37 379 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ASRGL1Q7L266 308 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ANGPTL5Q86XS5 388 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 FTMTQ8N4E7 242 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 TRMT10AQ8TBZ6 339 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 NSMCE2Q96MF7 247 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 OR8B4Q96RC9 309 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 ASCL2Q99929 193 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 NIPSNAP1Q9BPW8 284 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 CHID1Q9BWS9 393 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 NIPAL2Q9H841 368 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 IL20Q9NYY1 176 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 IL36RNQ9UBH0 155 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 BIRC6Q9NR09 4857 aa9.35□□□□□ -0.91
NSMCE1-202ENST00000561960 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 F8VVB4 439 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 F8VWA3 439 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 MMP23AO75900 390 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 TK1P04183 234 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ATP6V1B2P21281 511 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 OR12D2P58182 307 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ACTA2P62736 377 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ACTG2P63267 376 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ACTC1P68032 377 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ACTA1P68133 377 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 CBX1P83916 185 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 SMIM21Q3B7S5 101 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 CEACAM21Q3KPI0 293 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 FAM76BQ5HYJ3 339 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 HACD2Q6Y1H2 254 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 POC1AQ8NBT0 407 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 PAPD5Q8NDF8 572 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 WFDC9Q8NEX5 89 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 ZNF671Q8TAW3 534 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 TFAP2CQ92754 450 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 CHST6Q9GZX3 395 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 FAM107BQ9H098 131 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 GORASP2Q9H8Y8 452 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 IL1RAPQ9NPH3 570 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 GPR84Q9NQS5 396 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 MRGBPQ9NV56 204 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
NSMCE1-202ENST00000561960 H3BN98 237 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 IFNGP01579 166 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 IGHV1-8P0DP01 117 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 RAB25P57735 213 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 RPS7P62081 194 aaKnown RBP9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF626Q68DY1 528 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 RPL13AP3Q6NVV1 102 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 RNF144BQ7Z419 303 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF329Q86UD4 541 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF561Q8N587 486 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 ZNF676Q8N7Q3 588 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 OR13D1Q8NGV5 346 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 OTOSQ8NHW6 89 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 CDRT15Q96T59 188 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 TEAD3Q99594 435 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 B9D2Q9BPU9 175 aa9.33□□□□□ -0.92
NSMCE1-202ENST00000561960 CMC2Q9NRP2 79 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms