RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MYL9P24844 172 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 NPY1RP25929 384 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 CLDN6P56747 220 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 PAFAH1B2P68402 229 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 C5orf47Q569G3 176 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
SMG1-204ENST00000561940 TPRG1LQ5T0D9 272 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 OR2T5Q6IEZ7 315 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 ASCL4Q6XD76 172 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 OR4A15Q8NGL6 344 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 OR2T29Q8NH02 315 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 OR10G6Q8NH81 332 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 ZNF461Q8TAF7 563 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 KCNS1Q96KK3 526 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
SMG1-204ENST00000561940 REEP1Q9H902 201 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 RBFOX1Q9NWB1 397 aaKnown RBP3.66□□□□□ -1.82
SMG1-204ENST00000561940 ZNF257Q9Y2Q1 563 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 BAHCC1Q9P281 2608 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 SCN11AQ9UI33 1791 aa3.66□□□□□ -1.82
SMG1-204ENST00000561940 ITGB4P16144 1822 aa3.65□□□□□ -1.82
SMG1-204ENST00000561940 BDP1A6H8Y1 2624 aa3.65□□□□□ -1.82
SMG1-204ENST00000561940 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 LRCOL1A6NCL2 159 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 HACD1B0YJ81 288 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 CHST10O43529 356 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 RAD1O60671 282 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 CTNSO60931 367 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 OTCP00480 354 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 IGKV2D-28P01615 120 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 IGLV3-25P01717 112 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 AP1S2P56377 157 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 OR2B8PP59922 312 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 SIGLEC14Q08ET2 396 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 CDC20Q12834 499 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 C16orf72Q14CZ0 275 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 ZFP1Q6P2D0 407 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 RTL4Q6ZR62 310 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 WDR31Q8NA23 367 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 C19orf18Q8NEA5 215 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 OR52K1Q8NGK4 314 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 LINC01560Q8TB33 94 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 RXFP4Q8TDU9 374 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 ASZ1Q8WWH4 475 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 TFGQ92734 400 aaPredicted RBP3.65□□□□□ -1.83
SMG1-204ENST00000561940 RNF5Q99942 180 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 C11orf49Q9H6J7 331 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 ZNF835Q9Y2P0 537 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 UNC79Q9P2D8 2635 aa3.65□□□□□ -1.83
SMG1-204ENST00000561940 AFDNP55196 1824 aaKnown RBP3.65□□□□□ -1.83
SMG1-204ENST00000561940 BCORQ6W2J9 1755 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 IGLV4-60A0A075B6I1 120 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 A0A1B0GUH1 482 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 WISP3O95389 354 aaPredicted RBP3.64□□□□□ -1.83
SMG1-204ENST00000561940 CCNE2O96020 404 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 THRAP10827 490 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 CXCL12P48061 93 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 SHHQ15465 462 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 HSP90AA4PQ58FG1 418 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 TMEM256Q8N2U0 113 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 ZNF709Q8N972 641 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 OR51L1Q8NGJ5 315 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 OR1J4Q8NGS1 313 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 C18orf15Q96N68 181 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 CHID1Q9BWS9 393 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 CYTL1Q9NRR1 136 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 ADA2Q9NZK5 511 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 SYNRGQ9UMZ2 1314 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 CENPFP49454 3210 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 AK9Q5TCS8 1911 aa3.64□□□□□ -1.83
SMG1-204ENST00000561940 LAMA2P24043 3122 aaKnown RBP3.63□□□□□ -1.83
SMG1-204ENST00000561940 A0A0B4J2E0 115 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 OR5H1A6NKK0 313 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 COLCA2A8K830 154 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 TNFRSF11BO00300 401 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 HLA-DQB1P01920 261 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 ZNF688P0C7X2 276 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 HTR1DP28221 377 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 YWHAEP62258 255 aaKnown RBP3.63□□□□□ -1.83
SMG1-204ENST00000561940 PNOCQ13519 176 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 OR1Q1Q15612 314 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 NKAIN1Q4KMZ8 207 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 KDM4DQ6B0I6 523 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 TTLQ8NG68 377 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 LILRB4Q8NHJ6 448 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 RXFP2Q8WXD0 754 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 OR8D1Q8WZ84 308 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 RCN3Q96D15 328 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 FAM19A4Q96LR4 140 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 OR51B2Q9Y5P1 312 aa3.63□□□□□ -1.83
SMG1-204ENST00000561940 COL5A3P25940 1745 aaPredicted RBP3.63□□□□□ -1.83
SMG1-204ENST00000561940 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
SMG1-204ENST00000561940 TMEM131Q92545 1883 aa3.62□□□□□ -1.83
SMG1-204ENST00000561940 MON2Q7Z3U7 1717 aa3.62□□□□□ -1.83
SMG1-204ENST00000561940 LAMB4A4D0S4 1761 aa3.62□□□□□ -1.83
SMG1-204ENST00000561940 LTN1O94822 1766 aa3.62□□□□□ -1.83
SMG1-204ENST00000561940 IGHV3-72A0A0B4J1Y9 119 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms