RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PRSS58Q8IYP2 241 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 OR10AD1Q8NGE0 317 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 OR2G3Q8NGZ4 309 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 CA5BP1Q8WTZ4 195 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 KCNK17Q96T54 332 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 MCTS1Q9ULC4 181 aaKnown RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 B3GALT1Q9Y5Z6 326 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 HSD17B6O14756 317 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 PHOX2AO14813 284 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 BCAT2O15382 392 aaPredicted RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 IGHMP01871 453 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 MDKP21741 143 aaPredicted RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 OMGP23515 440 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 GABRR1P24046 479 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 CDAP32320 146 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 PLCXD2Q0VAA5 305 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 PHLDA2Q53GA4 152 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 P4HA3Q7Z4N8 544 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 CYB561D1Q8N8Q1 229 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 FRZBQ92765 325 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 LIN37Q96GY3 246 aaPredicted RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 SLC46A1Q96NT5 459 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 PISDQ9UG56 409 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 KCNIP3Q9Y2W7 256 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 SLCO1B1Q9Y6L6 691 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 SPAG17Q6Q759 2223 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 NSG1A0A0A6YYJ2 146 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 IGKV1-9A0A0C4DH69 117 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 A6NIZ1 184 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 TMEM225BP0DP42 221 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 COL9A1P20849 921 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 LMO1P25800 156 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 BIDP55957 195 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 ZNF121P58317 390 aaPredicted RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 RAP1BP61224 184 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 OGFOD3Q6PK18 319 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 LFNGQ8NES3 379 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 POM121Q96HA1 1249 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 TLCD2A6NGC4 264 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 STMND1H3BQB6 276 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 SNRPCP09234 159 aaKnown RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 TMEM196Q5HYL7 178 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 HLA-DQA1Q5Y7H0 255 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 FBXW12Q6X9E4 464 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 FAM57BQ71RH2 274 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 CPEB2Q7Z5Q1 589 aaKnown RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 TGIF2LXQ8IUE1 241 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 LRRC18Q8N456 261 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 ABHD5Q8WTS1 349 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 VN1R1Q9GZP7 353 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 LIME1Q9H400 295 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 NXT1Q9UKK6 140 aaKnown RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 CTSDP07339 412 aaPredicted RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 ZNF17P17021 662 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 RRADP55042 308 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 HSF1Q00613 529 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 HHEXQ03014 270 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 TLE3Q04726 772 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 TMEM176BQ3YBM2 270 aaPredicted RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 AKR1C8PQ5T2L2 129 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 ZNF385CQ66K41 422 aaPredicted RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 YAF2Q8IY57 180 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 ADIPOR1Q96A54 375 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 PACRGQ96M98 296 aaPredicted RBP14.47□□□□□ -0.09
TPM1-228ENST00000560975 BCO1Q9HAY6 547 aa14.47□□□□□ -0.09
TPM1-228ENST00000560975 SRP19P09132 144 aaKnown RBP14.46□□□□□ -0.09
TPM1-228ENST00000560975 OR1D4P47884 311 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 NOVA1P51513 510 aaKnown RBP14.46□□□□□ -0.09
TPM1-228ENST00000560975 CASP6P55212 293 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 HSD11B2P80365 405 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 ABCA11PQ4W5N1 156 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 GRINAQ7Z429 371 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 OR5L1Q8NGL2 311 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 TMED3Q9Y3Q3 217 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 LTBP2Q14767 1821 aa14.46□□□□□ -0.09
TPM1-228ENST00000560975 C5orf63A6NC05 138 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 SHISA8B8ZZ34 492 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 PTBP3O95758 552 aaKnown RBP14.46□□□□□ -0.1
TPM1-228ENST00000560975 OPN1LWP04000 364 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 JMJD7P0C870 316 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 OPRM1P35372 400 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 DAP3P51398 398 aaKnown RBP14.46□□□□□ -0.1
TPM1-228ENST00000560975 CYB5R2Q6BCY4 276 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 Q6ZSR6 202 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.46□□□□□ -0.1
TPM1-228ENST00000560975 AK3Q9UIJ7 227 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 CA14Q9ULX7 337 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 CHD9Q3L8U1 2897 aa14.46□□□□□ -0.1
TPM1-228ENST00000560975 FAM24AA6NFZ4 105 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 ZNF724A8MTY0 619 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 ALG1L2C9J202 215 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 FTCDNL1E5RQL4 147 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 H3BML4 177 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 SLC33A1O00400 549 aaPredicted RBP14.45□□□□□ -0.1
TPM1-228ENST00000560975 ATP6V0CP27449 155 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 KISS1Q15726 138 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 GPR157Q5UAW9 335 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 CARD17Q5XLA6 110 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 SPSB3Q6PJ21 355 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms