RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 NKIRAS2Q9NYR9 191 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 HSF4Q9ULV5 492 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 FLVCR2Q9UPI3 526 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 SLC25A15Q9Y619 301 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ARPC1BO15143 372 aaKnown RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 HTR3BO95264 441 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 IL5P05113 134 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 FAM87AP0C7U9 286 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 RAC2P15153 192 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 CXADRP78310 365 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OSR2Q8N2R0 312 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 SNRNP40Q96DI7 357 aaKnown RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 HIST1H2AAQ96QV6 131 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 TINAGL1Q9GZM7 467 aaPredicted RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 RTTNQ86VV8 2226 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 SPTBN2O15020 2390 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR5B21A6NL26 309 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 MSTNO14793 375 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 PLATP00750 562 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 SFTPBP07988 381 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 ZMYND11Q15326 602 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
SNX1-211ENST00000560829 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 CD276Q5ZPR3 534 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 ELP2Q6IA86 826 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR2T2Q6IF00 324 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 UNQ6126/PRO20091Q6UXV3 157 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 TCTE3Q8IZS6 198 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR4S1Q8NGB4 309 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 SLC25A21Q9BQT8 299 aaPredicted RBP11.07□□□□□ -0.64
SNX1-211ENST00000560829 GINS4Q9BRT9 223 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR2J1Q9GZK6 312 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR51B6Q9H340 312 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 ZNF629Q9UEG4 869 aaPredicted RBP11.07□□□□□ -0.64
SNX1-211ENST00000560829 BOD1L1Q8NFC6 3051 aa11.07□□□□□ -0.64
SNX1-211ENST00000560829 ZNF732B4DXR9 585 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 M0QYG6 137 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 LILRA1O75019 489 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 AGFG2O95081 481 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FCER2P06734 321 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 CECR9P0C854 216 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SELEP16581 610 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 IL32P24001 234 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 OPRM1P35372 400 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 ST3GAL2Q16842 350 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 METTL11BQ5VVY1 283 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SIGIRRQ6IA17 410 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 GFRALQ6UXV0 394 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SLC25A26Q70HW3 274 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 C1orf174Q8IYL3 243 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FBXW5Q969U6 566 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 NOP16Q9Y3C1 178 aaKnown RBP11.06□□□□□ -0.64
SNX1-211ENST00000560829 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A10PA6NDY2 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A18PA6NE21 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A16PA6NEW6 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A20PA6NIJ5 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A8PA6NJQ4 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A7PA6NKC0 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A22PA8MWA6 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A12PA8MX19 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A5PA8MXJ8 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A23PA8MXZ1 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 DISC1C4P0D8 188 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 PRSS44E7EML9 344 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 PYCARD-AS1I3L0S3 204 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 AMY2AP04746 511 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A15PP0C7V4 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A13PP0C7W8 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A14PP0C7W9 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FAM90A24PP0C7X0 464 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 GABRR1P24046 479 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 CHATP28329 748 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 HAAOP46952 286 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 GPM6AP51674 278 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 GNG3P63215 75 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 ARFRP1Q13795 201 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 TAF9Q16594 264 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 ACTBL2Q562R1 376 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 NHLRC3Q5JS37 347 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SPATA46Q5T0L3 261 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 GLDNQ6ZMI3 551 aaPredicted RBP11.06□□□□□ -0.64
SNX1-211ENST00000560829 C3P1Q6ZMU1 363 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 HOGA1Q86XE5 327 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 FBXL14Q8N1E6 418 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 BPIFB2Q8N4F0 458 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 BHLHE23Q8NDY6 225 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 OR1J1Q8NGS3 322 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 MARS2Q96GW9 593 aaKnown RBP11.06□□□□□ -0.64
SNX1-211ENST00000560829 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms