RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FBXL14Q8N1E6 418 aa9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 C15orf40Q8WUR7 153 aa9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 URM1Q9BTM9 101 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 ETAA1Q9NY74 926 aa9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 RABL2AQ9UBK7 228 aaPredicted RBP9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 RABL2BQ9UNT1 228 aa9.33□□□□□ -0.92
SNRPA1-211ENST00000560433 IGHV1-18A0A0C4DH31 117 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 FAM221AA4D161 298 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 OR5H1A6NKK0 313 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 H0YL77 283 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 SYNGR1O43759 233 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CYB5AP00167 134 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CSF1P09603 554 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CBR1P16152 277 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 HIST1H1DP16402 221 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ANXA7P20073 488 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 PSMB1P20618 241 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 DUSP1P28562 367 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 GNG2P59768 71 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 PSG7Q13046 419 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ARFRP1Q13795 201 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 SIGIRRQ6IA17 410 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 GIMAP1Q8WWP7 306 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ST6GALNAC5Q9BVH7 336 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 RANGRFQ9HD47 186 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CACNA1AO00555 2505 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ANKRD30BLA7E2S9 258 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 M0R1B8 84 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ATXN7O15265 892 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 RHBDL1O75783 438 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 RAB3DO95716 219 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 PMP2P02689 132 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 HPXP02790 462 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 AMY2AP04746 511 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 UBBP0CG47 229 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 AKAIN1P0CW23 69 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 BCL3P20749 454 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CEACAM8P31997 349 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 CAPZA1P52907 286 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 MRPL49Q13405 166 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.922e-9■■■■■ 38.5
SNRPA1-211ENST00000560433 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 DPPA2Q7Z7J5 298 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 OR10AD1Q8NGE0 317 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 OR56B1Q8NGI3 324 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 OR5L1Q8NGL2 311 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 KLF14Q8TD94 323 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 GINS4Q9BRT9 223 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 FAAP24Q9BTP7 215 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 PLEKHJ1Q9NW61 149 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 NPAP1Q9NZP6 1156 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 FBLN5Q9UBX5 448 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 ST3GAL6Q9Y274 331 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 NUBP2Q9Y5Y2 271 aa9.32□□□□□ -0.92
SNRPA1-211ENST00000560433 A0A0A6YYH2 397 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 PQLC2LA1A4F0 135 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 A6NJ64 397 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF736B4DX44 427 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 PYCARD-AS1I3L0S3 204 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 HSPB6O14558 160 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 CHRM2P08172 466 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 RCVRNP35243 200 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 HRH1P35367 487 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 RAD52P43351 418 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ALDH3B1P43353 468 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 UCNP55089 124 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 P2RY6Q15077 328 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 CEACAM21Q3KPI0 293 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 VHLLQ6RSH7 139 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 UNQ6494/PRO21346Q6UXR6 183 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 OR52B4Q8NGK2 314 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 Q96M66 194 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 PECRQ9BY49 303 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 IFT46Q9NQC8 304 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 MTCH1Q9NZJ7 389 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 SLC25A15Q9Y619 301 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 POLEQ07864 2286 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 A8MXE2 369 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 MFNGO00587 321 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF205O95201 554 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 RLN1P04808 185 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF35P13682 527 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ACTBP60709 375 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ACTG1P63261 375 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ST3GAL2Q16842 350 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 C17orf107Q6ZR85 190 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 BTN2A1Q7KYR7 527 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 OSR2Q8N2R0 312 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 FAM89BQ8N5H3 189 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 OR6F1Q8NGZ6 308 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ZCCHC14Q8WYQ9 949 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 SNAPC3Q92966 411 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms