RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 LHX4Q969G2 390 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 RFKQ969G6 155 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 HRASLS5Q96KN8 279 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF488Q96MN9 340 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 NLKQ9UBE8 527 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 IGKV1D-17A0A075B6S4 117 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 NKX6-3A6NJ46 265 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 E9PQ18 207 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 SYNGR1O43759 233 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 PSG2P11465 335 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 HAAOP46952 286 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 DLX1P56177 255 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TMED1Q13445 227 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TP53I3Q53FA7 332 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 AWAT1Q58HT5 328 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 Q6ZSR3 168 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 BATF2Q8N1L9 274 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
IDH3A-219ENST00000560414 WFDC12Q8WWY7 111 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TMIGD2Q96BF3 282 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 RNFT2Q96EX2 444 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 WDR89Q96FK6 387 aaPredicted RBP12.11□□□□□ -0.47
IDH3A-219ENST00000560414 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 SLC29A1Q99808 456 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 DCTN5Q9BTE1 182 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 DNTTIP1Q9H147 329 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 S100A14Q9HCY8 104 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 TNFRSF19Q9NS68 423 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 ACOXLQ9NUZ1 547 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 GNG8Q9UK08 70 aa12.11□□□□□ -0.47
IDH3A-219ENST00000560414 IGHV1-69DA0A0B4J2H0 117 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 A0A1B0GVI7 797 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 DLGAP1O14490 977 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SIGLEC5O15389 551 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 HOXA3O43365 443 aaPredicted RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SYT7O43581 403 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SULT1C4O75897 302 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 IGHV1-69P01742 117 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 PF4P02776 101 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 ACAA1P09110 424 aaPredicted RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 HKR1P10072 659 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 NDUFB7P17568 137 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 CCL1P22362 96 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 IL13RA1P78552 427 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 CDONQ4KMG0 1287 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 VMO1Q7Z5L0 202 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 ANGPTL5Q86XS5 388 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 RDH10Q8IZV5 341 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 TRMT10AQ8TBZ6 339 aaKnown RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SLC25A28Q96A46 364 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 MED30Q96HR3 178 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 RHOVQ96L33 236 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 ELL3Q9HB65 397 aaPredicted RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SIRT7Q9NRC8 400 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 SLC25A10Q9UBX3 287 aaPredicted RBP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF222Q9UK12 451 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.1□□□□□ -0.47
IDH3A-219ENST00000560414 MAB21L2Q9Y586 359 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 KPTNQ9Y664 436 aa12.1□□□□□ -0.47
IDH3A-219ENST00000560414 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 CLDN34H7C241 214 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 J3QT63 122 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 KIR3DL2P43630 455 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 BPIFB3P59826 476 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 PDCD1Q15116 288 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 SLC25A30Q5SVS4 291 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 FDX2Q6P4F2 183 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 ACP7Q6ZNF0 438 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF573Q86YE8 665 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 POC1AQ8NBT0 407 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 NPRL2Q8WTW4 380 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 ZMAT3Q9HA38 289 aaKnown RBP12.09□□□□□ -0.47
IDH3A-219ENST00000560414 GMPPBQ9Y5P6 360 aa12.09□□□□□ -0.47
IDH3A-219ENST00000560414 FAM230AA0A1W2PPH8 454 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 RFPL4AA6NLU0 287 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 RFPL4AL1F8VTS6 287 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 J3QRE1 110 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 PGA5P0DJD9 388 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 CEBPDP49716 269 aaPredicted RBP12.08□□□□□ -0.48
IDH3A-219ENST00000560414 OR12D2P58182 307 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 ISL1P61371 349 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 UBE2V2Q15819 145 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 Q6YL49 198 aa12.08□□□□□ -0.48
IDH3A-219ENST00000560414 ZBTB49Q6ZSB9 765 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms