RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
HERC1-207ENST00000560316 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
HERC1-207ENST00000560316 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
HERC1-207ENST00000560316 DCAF13Q9NV06 445 aaKnown RBP13.23□□□□□ -0.29
HERC1-207ENST00000560316 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
HERC1-207ENST00000560316 TK1P04183 234 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 IGHV1-8P0DP01 117 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 NUDT2P50583 147 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 CEACAM21Q3KPI0 293 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 GLYATQ6IB77 296 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 C18orf65Q6ZTR6 163 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 POC1AQ8NBT0 407 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 OR51D1Q8NGF3 324 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 OR8B12Q8NGG6 310 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 BCAS4Q8TDM0 211 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 OR8B4Q96RC9 309 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 INTS14Q96SY0 518 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
HERC1-207ENST00000560316 OR14J1Q9UGF5 321 aa13.22□□□□□ -0.29
HERC1-207ENST00000560316 SAMD4AQ9UPU9 718 aaKnown RBP13.22□□□□□ -0.29
HERC1-207ENST00000560316 H3BUI4 141 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 ZFPL1O95159 310 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 RRM2P31350 389 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
HERC1-207ENST00000560316 MOB3CQ70IA8 216 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 FAM81AQ8TBF8 368 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 PRR25Q96S07 402 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
HERC1-207ENST00000560316 TBC1D23Q9NUY8 699 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 MINOS1-NBL1R4GNA1 71 aa13.21□□□□□ -0.29
HERC1-207ENST00000560316 HUWE1Q7Z6Z7 4374 aaKnown RBP13.2□□□□□ -0.3
HERC1-207ENST00000560316 SEMG1P04279 462 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 ACTA2P62736 377 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 ACTG2P63267 376 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 ACTC1P68032 377 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 ACTA1P68133 377 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 RPL13AP3Q6NVV1 102 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 C8orf86Q6ZUL3 223 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
HERC1-207ENST00000560316 OR9Q2Q8NGE9 314 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 OR5A2Q8NGI9 324 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 RP9Q8TA86 221 aaKnown RBP13.2□□□□□ -0.3
HERC1-207ENST00000560316 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 AKR1E2Q96JD6 320 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 LYSTQ99698 3801 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 SLC25A33Q9BSK2 321 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 MED20Q9H944 212 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
HERC1-207ENST00000560316 IGHV2-26A0A0B4J1V2 119 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 NXPH2O95156 264 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 RBP4P02753 201 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 AMY1AP04745 511 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 AMY2AP04746 511 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 PGA5P0DJD9 388 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 GSTT1P30711 240 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 BLVRAP53004 296 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 EDDM3BP56851 147 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 RPL23AP62750 156 aaKnown RBP13.19□□□□□ -0.3
HERC1-207ENST00000560316 DOC2BQ14184 412 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 ZNF329Q86UD4 541 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 ASCC1Q8N9N2 400 aaKnown RBP13.19□□□□□ -0.3
HERC1-207ENST00000560316 BTBD10Q9BSF8 475 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 TSSK6Q9BXA6 273 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
HERC1-207ENST00000560316 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
HERC1-207ENST00000560316 LCE6AA0A183 80 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 OR5B21A6NL26 309 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 K7N7A8 449 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 COX4I1P13073 169 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 MAP2K3P46734 347 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 CGB2Q6NT52 195 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 SHFQ7M4L6 423 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 KRT74Q7RTS7 529 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 THEM6Q8WUY1 208 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 STMN2Q93045 179 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 PYURFQ96I23 114 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 ZNF714Q96N38 554 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 VNN3Q9NY84 501 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
HERC1-207ENST00000560316 PSMB11A5LHX3 300 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 FAM183AA6NL82 134 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 NUDT19A8MXV4 375 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 RAMP3O60896 148 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 LYNP07948 512 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 MYCNOSP40205 109 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 HAAOP46952 286 aa13.17□□□□□ -0.3
HERC1-207ENST00000560316 PSMA6P60900 246 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms