RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 FCGR1AP12314 374 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 SELLP14151 372 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 FASP25445 335 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 GABRA5P31644 462 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 PRDX2P32119 198 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 RELBQ01201 579 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 KLRD1Q13241 179 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OCLNQ16625 522 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 C2orf68Q2NKX9 166 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 C11orf88Q6PI97 169 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 ACP7Q6ZNF0 438 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 Q6ZTK2 550 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 Q8N7P7 452 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 TCEANCQ8N8B7 351 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 POC1AQ8NBT0 407 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 BEND2Q8NDZ0 799 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 CCDC54Q8NEL0 328 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OR4C13Q8NGP0 309 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 TMEM163Q8TC26 289 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 SDSLQ96GA7 329 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 APOL4Q9BPW4 351 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 TTTY10Q9BZA0 68 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 PPA2Q9H2U2 334 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 C16orf95Q9H693 158 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 CLN6Q9NWW5 311 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 USE1Q9NZ43 259 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OR14J1Q9UGF5 321 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OR52A1Q9UKL2 312 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 DHRS7CA6NNS2 312 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 PRKYO43930 277 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 GATBO75879 557 aaKnown RBP10.3□□□□□ -0.76
SNX1-209ENST00000559961 RPP14O95059 124 aaKnown RBP10.3□□□□□ -0.76
SNX1-209ENST00000559961 CYB5AP00167 134 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 DAPP51397 102 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 ERVFRD-1P60508 538 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 SRSF4Q08170 494 aaKnown RBP10.3□□□□□ -0.76
SNX1-209ENST00000559961 FAHD1Q6P587 224 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 Q6ZSV7 163 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 KRT74Q7RTS7 529 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 FAM220AQ7Z4H9 259 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 ELMOD2Q8IZ81 293 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 RFKQ969G6 155 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 SSX3Q99909 188 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 SEMA6AQ9H2E6 1030 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 GPR173Q9NS66 373 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 WARS2Q9UGM6 360 aaKnown RBP10.3□□□□□ -0.76
SNX1-209ENST00000559961 GLS2Q9UI32 602 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 AP4S1Q9Y587 144 aa10.3□□□□□ -0.76
SNX1-209ENST00000559961 FAM230AA0A1W2PPH8 454 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 CCDC182A6NF36 153 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 H3BUX3 64 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 SYT7O43581 403 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 FCN3O75636 299 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 CIB2O75838 187 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 TSPAN9O75954 239 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 AMY2BP19961 511 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 PRB3Q04118 309 aaPredicted RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 ATP6AP1Q15904 470 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 LRRC75BQ2VPJ9 315 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 DMRTC1Q5HYR2 192 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 C1orf146Q5VVC0 180 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 CALHM1Q8IU99 346 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 ASCC1Q8N9N2 400 aaKnown RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 OR13D1Q8NGV5 346 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 IL4I1Q96RQ9 567 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 MYCBPQ99417 103 aaPredicted RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 RBM4BQ9BQ04 359 aaKnown RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
SNX1-209ENST00000559961 MAB21L2Q9Y586 359 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 ORC6Q9Y5N6 252 aa10.29□□□□□ -0.76
SNX1-209ENST00000559961 TENM1Q9UKZ4 2725 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 KCNAB3O43448 404 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 NOS1APO75052 506 aaPredicted RBP10.28□□□□□ -0.76
SNX1-209ENST00000559961 PEX14O75381 377 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 TTRP02766 147 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 TFF1P04155 84 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 CHRM2P08172 466 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 CSF1P09603 554 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 OR2T7P0C7T2 308 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 PGA5P0DJD9 388 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 PROK1P58294 105 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 CDC42P60953 191 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 AANATQ16613 207 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 SLX4IPQ5VYV7 408 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 SLC35E4Q6ICL7 350 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 PLEKHG7Q6ZR37 379 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 GDPD3Q7L5L3 318 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 PNKDQ8N490 385 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 OR10H4Q8NGA5 316 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 OR4M1Q8NGD0 313 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 TNFRSF14Q92956 283 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 UTP4Q969X6 686 aaKnown RBP10.28□□□□□ -0.76
SNX1-209ENST00000559961 MRPL48Q96GC5 212 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms