RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SCGB3A2Q96PL1 93 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 DNTTIP1Q9H147 329 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 DEPPQ9NTK1 212 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM38BQ9NVV0 291 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 AK3Q9UIJ7 227 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 LRRC3CA6NJW4 275 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF716A6NP11 495 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 FGF16O43320 207 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 IGHV3-9P01782 118 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 HTR5AP47898 357 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 CLDN15P56746 228 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RAC3P60763 192 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RSU1Q15404 277 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 PLEKHN1Q494U1 663 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RPUSD3Q6P087 351 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF585AQ6P3V2 769 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 Q6ZSR3 168 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 AAED1Q7RTV5 226 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 BAP18Q8IXM2 172 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 MARC2Q969Z3 335 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF845Q96IR2 970 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM231Q9H6L2 316 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 C14orf166Q9Y224 244 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 NCKAP5O14513 1909 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 IGKV1-12A0A0C4DH73 117 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 IGKV1D-12P01611 117 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 SRD5A2P31213 254 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 PSG4Q00888 419 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 AIMP2Q13155 320 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 EIF3IQ13347 325 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TRA2AQ13595 282 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RBM39Q14498 530 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 PIGYQ3MUY2 71 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 ESX1Q8N693 406 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 SLC30A7Q8NEW0 376 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 OR10D3Q8NH80 312 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RHBDD1Q8TEB9 315 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 INTS12Q96CB8 462 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 MARS2Q96GW9 593 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 SULT4A1Q9BR01 284 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 ADAT1Q9BUB4 502 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 METTL9Q9H1A3 318 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 GLS2Q9UI32 602 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 FREM2Q5SZK8 3169 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 CCDC163A0A0D9SF12 145 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ACTL6AO96019 429 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 APOC1P02654 83 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 CSTBP04080 98 aaKnown RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 LYL1P12980 280 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ADCYAP1P18509 176 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 RCC1P18754 421 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 CEACAM16Q2WEN9 425 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 OR2A2Q6IF42 318 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 SULF2Q8IWU5 870 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 GPR137CQ8N3F9 429 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 TOMM40LQ969M1 308 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 WNT5BQ9H1J7 359 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 PIGMQ9H3S5 423 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 GJE1A6NN92 205 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 GPR31O00270 319 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ABCD4O14678 606 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 YKT6O15498 198 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 CST2P09228 141 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 RFC3P40938 356 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF92Q03936 586 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 IL15RAQ13261 267 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 TCEAL6Q6IPX3 200 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 SLC23A3Q6PIS1 610 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 TIPARPQ7Z3E1 657 aaKnown RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ABHD3Q8WU67 409 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 TCEAL3Q969E4 200 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 MRPL24Q96A35 216 aaKnown RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 SF3B5Q9BWJ5 86 aaKnown RBP8.73□□□□□ -1.01
LRRC28-216ENST00000559819 SLC5A7Q9GZV3 580 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 ANXA10Q9UJ72 324 aa8.73□□□□□ -1.01
LRRC28-216ENST00000559819 PCSK5Q92824 1860 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 OR6C6A6NF89 314 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF587BE7ETH6 402 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 LAMTOR5O43504 91 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 IFNA2P01563 188 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 CD79AP11912 226 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 TCN2P20062 427 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 HOXA6P31267 233 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 RBMXP38159 391 aaKnown RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 DUSP3P51452 185 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 IAH1Q2TAA2 248 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 MST1LQ2TV78 715 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 SP6Q3SY56 376 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 CDCP2Q5VXM1 449 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 UBALD2Q8IYN6 164 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM105Q8N8V8 129 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 OR2V1Q8NHB1 315 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 CT55Q8WUE5 264 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 C10orf35Q96D05 121 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 BORCS8Q96FH0 119 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 ADGRG7Q96K78 797 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 FOXB1Q99853 325 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms