RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
USP3-213ENST00000559711 RAB25P57735 213 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C3orf36Q3SXR2 165 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
USP3-213ENST00000559711 SPATA46Q5T0L3 261 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 FAAP20Q6NZ36 180 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 RTN4RL2Q86UN3 420 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 TMEM200AQ86VY9 491 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 SAXO1Q8IYX7 474 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ST8SIA4Q92187 359 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 HIST1H2AAQ96QV6 131 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 IGHV1-18A0A0C4DH31 117 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 SERPINE3A8MV23 424 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 ZNF736B4DX44 427 aaPredicted RBP10.88□□□□□ -0.67
USP3-213ENST00000559711 RAB3DO95716 219 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 PLATP00750 562 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 SELEP16581 610 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 NAT1P18440 290 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 RAD52P43351 418 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 GPM6AP51674 278 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 GNG2P59768 71 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 UNQ6126/PRO20091Q6UXV3 157 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 C1orf174Q8IYL3 243 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 ZNF611Q8N823 705 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 OR1J1Q8NGS3 322 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 OR6F1Q8NGZ6 308 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 OR8S1Q8NH09 359 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 DVL3Q92997 716 aaPredicted RBP10.88□□□□□ -0.67
USP3-213ENST00000559711 PECRQ9BY49 303 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 GHITMQ9H3K2 345 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
USP3-213ENST00000559711 Q9UFV3 132 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 TINAGQ9UJW2 476 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
USP3-213ENST00000559711 A0A0A6YYJ9 748 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 OR5B21A6NL26 309 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 IQCF6A8MYZ5 107 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 ZNF732B4DXR9 585 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 PEX14O75381 377 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 CCNKO75909 580 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 SFTPBP07988 381 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 CBX5P45973 191 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 MECP2P51608 486 aaKnown RBP10.87□□□□□ -0.67
USP3-213ENST00000559711 ERVS71-1P61550 626 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 RBPJQ06330 500 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 PPA1Q15181 289 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 ELP2Q6IA86 826 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 ZNF782Q6ZMW2 699 aaPredicted RBP10.87□□□□□ -0.67
USP3-213ENST00000559711 SLC25A26Q70HW3 274 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 OSR2Q8N2R0 312 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 GVQW1Q8N7I0 195 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 BHLHE23Q8NDY6 225 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 S100PBPQ96BU1 408 aa10.87□□□□□ -0.67
USP3-213ENST00000559711 MARS2Q96GW9 593 aaKnown RBP10.87□□□□□ -0.67
USP3-213ENST00000559711 NOP16Q9Y3C1 178 aaKnown RBP10.87□□□□□ -0.67
USP3-213ENST00000559711 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
USP3-213ENST00000559711 FCER2P06734 321 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 ZNF735P0CB33 412 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 TBPP20226 339 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 CA6P23280 308 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 MPZP25189 248 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 HAAOP46952 286 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 GNG3P63215 75 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 KLRB1Q12918 225 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 PSG7Q13046 419 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 MEF2DQ14814 521 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 RBMS2Q15434 407 aaKnown RBP10.86□□□□□ -0.67
USP3-213ENST00000559711 FAM76BQ5HYJ3 339 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 UNQ6494/PRO21346Q6UXR6 183 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 MRGPRGQ86SM5 289 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 ZNF573Q86YE8 665 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 OR4S1Q8NGB4 309 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 OR51S1Q8NGJ8 323 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
USP3-213ENST00000559711 CCDC120Q96HB5 630 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 ST6GAL2Q96JF0 529 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 TINAGL1Q9GZM7 467 aaPredicted RBP10.86□□□□□ -0.67
USP3-213ENST00000559711 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 IFT46Q9NQC8 304 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 NKIRAS2Q9NYR9 191 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 FLVCR2Q9UPI3 526 aa10.86□□□□□ -0.67
USP3-213ENST00000559711 INTS1Q8N201 2190 aaKnown RBP10.86□□□□□ -0.67
USP3-213ENST00000559711 RP1L1Q8IWN7 2480 aaPredicted RBP10.86□□□□□ -0.67
USP3-213ENST00000559711 PRSS44E7EML9 344 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 PRAF2O60831 178 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 BMP5P22003 454 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 GABRR1P24046 479 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 CALCRP30988 508 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 NPBWR2P48146 333 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 TAF9Q16594 264 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MKXQ8IYA7 352 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms