RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 DGCR6LQ9BY27 220 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 C1orf21Q9H246 121 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 SNX3O60493 162 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 ARG1P05089 322 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 VDAC2P45880 294 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 BLCAPP62952 87 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 CD83Q01151 205 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 SSX2Q16385 188 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 TMEM95Q3KNT9 176 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 MOB3CQ70IA8 216 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 CALHM1Q8IU99 346 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 PGAM4Q8N0Y7 254 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 IQCF1Q8N6M8 205 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 POC1AQ8NBT0 407 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 VNN3Q9NY84 501 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.32
CDC42BPB-205ENST00000559245 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 PF4V1P10720 104 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 MAGEA2P43356 314 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 DLX6P56179 175 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 MICAQ29983 383 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 DEFB121Q5J5C9 76 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 LDLRAD2Q5SZI1 272 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 PLCXD3Q63HM9 321 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 ZNF626Q68DY1 528 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR5AU1Q8NGC0 362 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR13D1Q8NGV5 346 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 U3KQV3 271 aa13.07□□□□□ -0.32
CDC42BPB-205ENST00000559245 A0A0U1RQV5 110 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 SYNGR1O43759 233 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 TK1P04183 234 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 ALDOBP05062 364 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 PGA5P0DJD9 388 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 DYNLT3P51808 116 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 TRPM8Q7Z2W7 1104 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 KRT77Q7Z794 578 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR8B4Q96RC9 309 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 OCSTAMPQ9BR26 566 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 MUC13Q9H3R2 512 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR14J1Q9UGF5 321 aa13.06□□□□□ -0.32
CDC42BPB-205ENST00000559245 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 H3BN98 237 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 F2RL2O00254 374 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 GSC2O15499 205 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 NXPH2O95156 264 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 PF4P02776 101 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 ATP6V1B1P15313 513 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 JUNBP17275 347 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 HAAOP46952 286 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 SLC35A2P78381 396 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 LCN8Q6JVE9 175 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 PLBD1Q6P4A8 553 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 CD300LDQ6UXZ3 194 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 COMMD2Q86X83 199 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR11H6Q8NGC7 330 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 ELAC2Q9BQ52 826 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 REEP1Q9H902 201 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 FAM206AQ9NX38 181 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 PIGLQ9Y2B2 252 aa13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 SAMHD1Q9Y3Z3 626 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-205ENST00000559245 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 MEX3AA1L020 520 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 J3QT63 122 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 NRASP01111 189 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ZNF728P0DKX0 622 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ALOX5APP20292 161 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR12D2P58182 307 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 KRTAP10-11P60412 298 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ZNF684Q5T5D7 378 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR2T5Q6IEZ7 315 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ZNF573Q86YE8 665 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 BATF2Q8N1L9 274 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR2T29Q8NH02 315 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 ENPP5Q9UJA9 477 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 LAMP5Q9UJQ1 280 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 HILPDAQ9Y5L2 63 aa13.04□□□□□ -0.32
CDC42BPB-205ENST00000559245 TMEM269A0A1B0GVZ9 245 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 K7N7A8 449 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 PSMD9O00233 223 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 PRODHO43272 600 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms