RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 SYT1P21579 422 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 PSMB5P28074 263 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ARR3P36575 388 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ACOT2P49753 483 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OR2B6P58173 313 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 C2orf54Q08AI8 447 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ADIGQ0VDE8 80 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ZNF816Q0VGE8 651 aaPredicted RBP0.95□□□□□ -2.26
USP3-209ENST00000558925 LAMTOR4Q0VGL1 99 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 STX3Q13277 289 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 PIGHQ14442 188 aaPredicted RBP0.95□□□□□ -2.26
USP3-209ENST00000558925 VAMP3Q15836 100 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 PSG3Q16557 428 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 COX19Q49B96 90 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 KLHL12Q53G59 568 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 C5orf47Q569G3 176 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 YIF1BQ5BJH7 314 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 HHATQ5VTY9 493 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 RESP18Q5W5W9 173 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 GUSBP11Q6P575 273 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 CLEC19AQ6UXS0 136 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SHISA6Q6ZSJ9 500 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 AHSA2Q719I0 299 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 PDPNQ86YL7 162 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 BBS7Q8IWZ6 715 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 UBALD2Q8IYN6 164 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SYCE1Q8N0S2 351 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 STK40Q8N2I9 435 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OSR2Q8N2R0 312 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 LRRC52Q8N7C0 313 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 LINC00469Q8N7U9 141 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SLC25A29Q8N8R3 303 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 NECAP1Q8NC96 275 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OR2Z1Q8NG97 314 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OR4K2Q8NGD2 314 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OR10Z1Q8NGY1 313 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 WDR34Q96EX3 536 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SMARCD1Q96GM5 515 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 FMC1Q96HJ9 113 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 CATSPER2Q96P56 530 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 METTL26Q96S19 204 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ACBD6Q9BR61 282 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 COPS4Q9BT78 406 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 TMED9Q9BVK6 235 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 BBS2Q9BXC9 721 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 LCE3DQ9BYE3 92 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SHCBP1LQ9BZQ2 653 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 GOLPH3Q9H4A6 298 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ASB7Q9H672 318 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 LINC00574Q9H8X3 128 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 C6orf50Q9HD87 102 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 VCX3AQ9NNX9 186 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 EXOSC4Q9NPD3 245 aaKnown RBP0.95□□□□□ -2.26
USP3-209ENST00000558925 C12orf4Q9NQ89 552 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 OR2S2Q9NQN1 319 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 RHBDL2Q9NX52 303 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 RBM12B-AS1Q9P1G2 102 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 ANXA10Q9UJ72 324 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 TFR2Q9UP52 801 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 CFL2Q9Y281 166 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 AP3M1Q9Y2T2 418 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 CBY1Q9Y3M2 126 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 SHANK1Q9Y566 2161 aa0.95□□□□□ -2.26
USP3-209ENST00000558925 BRWD3Q6RI45 1802 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 VWA8A3KMH1 1905 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 IGHV1-3A0A0C4DH29 117 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 A0A0G2JMP0 313 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 CENPVL3A0A0U1RRI6 287 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 A0A0X1KG70 313 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 KIR2DS1A0A191URI9 304 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 LRCOL1A6NCL2 159 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF850A8MQ14 1090 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 A8MUU9 505 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 BTNL10A8MVZ5 291 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 E7EWF7 191 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SMLR1H3BR10 107 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 LGALS9O00182 355 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF593O00488 134 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 CDIPTO14735 213 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 NEMFO60524 1076 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 PLIN3O60664 434 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 GATBO75879 557 aaKnown RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 CYB5R3P00387 301 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 RLN2P04090 185 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 GP1BAP07359 652 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SEC11BP0C7V7 166 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 RD3LP0DJH9 198 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 GIMD1P0DJR0 217 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 NTF3P20783 257 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 PRSS3P35030 304 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 MAGEA3P43357 314 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 MAGEA6P43360 314 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 TUFMP49411 452 aaKnown RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 PSMB2P49721 201 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 AQP5P55064 265 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 OR10A3P58181 314 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 TAS2R43P59537 309 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 PPP1CAP62136 330 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 RPL10AP62906 217 aaKnown RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 KDSRQ06136 332 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms