RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ZNF728P0DKX0 622 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 MAP2K3P46734 347 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 CBX1P83916 185 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 ABCA11PQ4W5N1 156 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 KCTD18Q6PI47 426 aaPredicted RBP14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 LINC00471Q8N535 108 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 OR5A2Q8NGI9 324 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 TFAP2CQ92754 450 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 TBC1D23Q9NUY8 699 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 OR14J1Q9UGF5 321 aa14.24□□□□□ -0.13
TSPAN3-204ENST00000558394 NXPH2O95156 264 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 IFNGP01579 166 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 IGHV1-8P0DP01 117 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 CLUP10909 449 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 JUNBP17275 347 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 RRM2P31350 389 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 OPRL1P41146 370 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 CEBPDP49716 269 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 ARHGDIBP52566 201 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 EDDM3BP56851 147 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 SAMD4BQ5PRF9 694 aaKnown RBP14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 LDLRAD2Q5SZI1 272 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 MOB3CQ70IA8 216 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 POC1AQ8NBT0 407 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 LIN7BQ9HAP6 207 aa14.23□□□□□ -0.13
TSPAN3-204ENST00000558394 FAM90A22PA8MWA6 464 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 H0YHG0 523 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 DNAJC8O75937 253 aaPredicted RBP14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 GSTT1P30711 240 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 THBS3P49746 956 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 DLX6P56179 175 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ACTA2P62736 377 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ACTG2P63267 376 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ACTC1P68032 377 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ACTA1P68133 377 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 C9orf152Q5JTZ5 239 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 CASC10Q5T4H9 136 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 PLCXD3Q63HM9 321 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 COMMD2Q86X83 199 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ASCC1Q8N9N2 400 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 MUC7Q8TAX7 377 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 OTULINQ96BN8 352 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 LYZL4Q96KX0 146 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 ZNF488Q96MN9 340 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 TSSK6Q9BXA6 273 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 EFCAB1Q9HAE3 211 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 IL20Q9NYY1 176 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 BAIAP2Q9UQB8 552 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 POLDIP2Q9Y2S7 368 aa14.22□□□□□ -0.13
TSPAN3-204ENST00000558394 MEX3AA1L020 520 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 RIIAD1A6NNX1 92 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 NUDT19A8MXV4 375 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 GSC2O15499 205 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 ZNF3P17036 446 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 BRS3P32247 399 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 C10orf99Q6UWK7 81 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 ZBTB49Q6ZSB9 765 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 GDPD3Q7L5L3 318 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 OR8B12Q8NGG6 310 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 THEM6Q8WUY1 208 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 PYURFQ96I23 114 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 ZNF714Q96N38 554 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 AMELYQ99218 206 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 ASCL2Q99929 193 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 SLC25A33Q9BSK2 321 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 NMNAT2Q9BZQ4 307 aa14.21□□□□□ -0.13
TSPAN3-204ENST00000558394 PSMB11A5LHX3 300 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 FABP3P05413 133 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 LYNP07948 512 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 PGA5P0DJD9 388 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 COX4I1P13073 169 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 HTR1DP28221 377 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 LINC01590Q5TEZ4 76 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 ETV3LQ6ZN32 361 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 ZNF573Q86YE8 665 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 OSR2Q8N2R0 312 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 ZNF676Q8N7Q3 588 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 Q8NFD4 153 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 OR2T33Q8NG76 320 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 BCAS4Q8TDM0 211 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 OR8B4Q96RC9 309 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 NIPAL2Q9H841 368 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 BIRC6Q9NR09 4857 aa14.2□□□□□ -0.14
TSPAN3-204ENST00000558394 DSCAML1Q8TD84 2053 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 RYR2Q92736 4967 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 J3QT63 122 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 K7N7A8 449 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 H2AFXP16104 143 aaPredicted RBP14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 CD24P25063 80 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 SLC6A1P30531 599 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 MYCNOSP40205 109 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 HAAOP46952 286 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 PSMA6P60900 246 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 RIPPLY1Q0D2K3 151 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 ZNF684Q5T5D7 378 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 RASSF6Q6ZTQ3 369 aa14.19□□□□□ -0.14
TSPAN3-204ENST00000558394 OR8D4Q8NGM9 314 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms