RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CLPXO76031 633 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 NXPH2O95156 264 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 GABRA5P31644 462 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 TGFBR2P37173 567 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 DAPP51397 102 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 CXCR4P61073 352 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 SMIM21Q3B7S5 101 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 PLA1AQ53H76 456 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 SLC35E4Q6ICL7 350 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 DEGS2Q6QHC5 323 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 ZNF322Q6U7Q0 402 aaPredicted RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 TCEANCQ8N8B7 351 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 OR5D13Q8NGL4 314 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 TRMT10AQ8TBZ6 339 aaKnown RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 DMRTB1Q96MA1 342 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 TBX5Q99593 518 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 NKX3-1Q99801 234 aaPredicted RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 POMPQ9Y244 141 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 TRBV23-1A0A0A0MS06 115 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 ZNF670-ZNF695F2Z2N8 137 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 ZNF254O75437 659 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 MTRF1O75570 445 aaKnown RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 DHRS3O75911 302 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 ATP6V1B1P15313 513 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 HOXB6P17509 224 aaKnown RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 PRDX2P32119 198 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 RPL31P62899 125 aaKnown RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 ACSM1Q08AH1 577 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 MEPCEQ7L2J0 689 aaKnown RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 POC1AQ8NBT0 407 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 OR2T27Q8NH04 317 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 IL4I1Q96RQ9 567 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
TPM1-211ENST00000558314 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
TPM1-211ENST00000558314 FAM230AA0A1W2PPH8 454 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 TCRBV3S1A0A5B6 114 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 J3QT63 122 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 DNAJC8O75937 253 aaPredicted RBP12.67□□□□□ -0.38
TPM1-211ENST00000558314 APOL3O95236 402 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 TTRP02766 147 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 CCL3L1P16619 93 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 BMXP51813 675 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 LGALS4P56470 323 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 ACTR3P61158 418 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 ROM1Q03395 351 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 CLVS2Q5SYC1 327 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 HCP5Q6MZN7 132 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 Q6ZTK2 550 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 ANGPTL5Q86XS5 388 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 ZNF573Q86YE8 665 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 BEND2Q8NDZ0 799 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 OR5K1Q8NHB7 308 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 DNAJC9Q8WXX5 260 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 RASL12Q9NYN1 266 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 OR52A1Q9UKL2 312 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 SLC22A13Q9Y226 551 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 R4GMQ9 66 aa12.67□□□□□ -0.38
TPM1-211ENST00000558314 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 TSPAN9O75954 239 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 CSF1P09603 554 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 LRRC75BQ2VPJ9 315 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 TMEM200BQ69YZ2 307 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 FAHD1Q6P587 224 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
TPM1-211ENST00000558314 OR4C13Q8NGP0 309 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 BCAS4Q8TDM0 211 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 HEXA-AS1Q9H8Q6 139 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 PLEKHA1Q9HB21 404 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 FOXJ3Q9UPW0 622 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
TPM1-211ENST00000558314 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 EPHA2P29317 976 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 ZBTB37Q5TC79 503 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 PPP1R35Q8TAP8 253 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 NRBF2Q96F24 287 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 MOB1AQ9H8S9 216 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 CLN6Q9NWW5 311 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
TPM1-211ENST00000558314 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
TPM1-211ENST00000558314 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
TPM1-211ENST00000558314 SNX5Q9Y5X3 404 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms