RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SLITRK2Q9H156 845 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 WDR13Q9H1Z4 485 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SLC25A10Q9UBX3 287 aaPredicted RBP8.33□□□□□ -1.08
USP3-207ENST00000558218 MRM2Q9UI43 246 aaKnown RBP8.33□□□□□ -1.08
USP3-207ENST00000558218 OAZ3Q9UMX2 235 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 SLC22A13Q9Y226 551 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 POLDIP2Q9Y2S7 368 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 PCDHGB1Q9Y5G3 927 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 ORC6Q9Y5N6 252 aa8.33□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PPH5 198 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 PQLC2LA1A4F0 135 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 HOXA3O43365 443 aaPredicted RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 RHBDL1O75783 438 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 SERPINA3P01011 423 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 ALPLP05186 524 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 CRYBA1P05813 215 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 RPSAP08865 295 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 PSG2P11465 335 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 FAHP16930 419 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 EEF1B2P24534 225 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 MPZP25189 248 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 POLR2IP36954 125 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 SNRPGP62308 76 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 MFGE8Q08431 387 aaPredicted RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 DGUOKQ16854 277 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 SMIM21Q3B7S5 101 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 CEP78Q5JTW2 689 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 PLCXD3Q63HM9 321 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 NCR3LG1Q68D85 454 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 HAGHLQ6PII5 290 aaPredicted RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 Q6ZS46 218 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 BCDIN3DQ7Z5W3 292 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 LDLRAD3Q86YD5 345 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 ZNF561Q8N587 486 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 FAM216BQ8N7L0 139 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 YIPF7Q8N8F6 280 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 POC1AQ8NBT0 407 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 OR51G2Q8NGK0 314 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 DYRK2Q92630 601 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 LHX4Q969G2 390 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 PPP1R14AQ96A00 147 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 EME1Q96AY2 570 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 SEH1LQ96EE3 360 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 GAFA1Q96PS6 74 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 ADI1Q9BV57 179 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 PKIBQ9C010 78 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 SEMA6AQ9H2E6 1030 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 DPAGT1Q9H3H5 408 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 METTL8Q9H825 291 aaKnown RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 SEBOXQ9HB31 216 aaPredicted RBP8.32□□□□□ -1.08
USP3-207ENST00000558218 USE1Q9NZ43 259 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 ZNF222Q9UK12 451 aa8.32□□□□□ -1.08
USP3-207ENST00000558218 IGKV1D-17A0A075B6S4 117 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PQL4 384 aaPredicted RBP8.31□□□□□ -1.08
USP3-207ENST00000558218 ANKRD61A6NGH8 418 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 J3QT63 122 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 NDUFA7O95182 113 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 MELTFP08582 738 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 PGA5P0DJD9 388 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 HAAOP46952 286 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ALDH3A2P51648 485 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ACTC1P68032 377 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ACTA1P68133 377 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ACSM1Q08AH1 577 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 IL24Q13007 206 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 IKZF1Q13422 519 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ACP7Q6ZNF0 438 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 CCDC121Q6ZUS5 278 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 VMO1Q7Z5L0 202 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 CATSPERDQ86XM0 798 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 CALHM1Q8IU99 346 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 OR5D13Q8NGL4 314 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 OR4F5Q8NH21 305 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 DUX5Q96PT3 197 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 FAM234AQ9H0X4 552 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 RIBC2Q9H4K1 309 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 ZNF696Q9H7X3 374 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 BEX1Q9HBH7 125 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 SNTG1Q9NSN8 517 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 IMPAD1Q9NX62 359 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 SLC7A11Q9UPY5 501 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 FAM96BQ9Y3D0 163 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 MAB21L2Q9Y586 359 aa8.31□□□□□ -1.08
USP3-207ENST00000558218 SOX21Q9Y651 276 aaPredicted RBP8.31□□□□□ -1.08
USP3-207ENST00000558218 A0A1B0GW55 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PR64 198 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 E9PQ18 207 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 M0R129 80 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 SLC1A7O00341 560 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 SYT7O43581 403 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 MPZL2O60487 215 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
USP3-207ENST00000558218 ISG15P05161 165 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 FBP1P09467 338 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L2P0CJ85 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L3P0CJ86 424 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms