RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 WIPI2Q9Y4P8 454 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 TANC2Q9HCD6 1990 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 MYO9AB2RTY4 2548 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 ISPDA4D126 451 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 AKR7A2O43488 359 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 SLC25A16P16260 332 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 SRMP19623 302 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 GALP22466 123 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 CD80P33681 288 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 C22orf42Q6IC83 251 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 GCSAMQ8N6F7 178 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 C19orf18Q8NEA5 215 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 OR10Z1Q8NGY1 313 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 NKX3-1Q99801 234 aaPredicted RBP17.88■□□□□ 0.45
CASC4-204ENST00000557945 CHCHD6Q9BRQ6 235 aa17.88■□□□□ 0.45
CASC4-204ENST00000557945 PPIAL4EA0A075B759 164 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 LOC100506127A0A0U1RQW1 187 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 PPIAL4DF5H284 164 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 CYB5AP00167 134 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 PPIAL4FP0DN26 164 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 EGR1P18146 543 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 MPZP25189 248 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 ZNF93P35789 620 aaPredicted RBP17.87■□□□□ 0.45
CASC4-204ENST00000557945 CFHR2P36980 270 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 BTG1P62324 171 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 IL24Q13007 206 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 SFRP4Q6FHJ7 346 aaPredicted RBP17.87■□□□□ 0.45
CASC4-204ENST00000557945 BATF2Q8N1L9 274 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 DEFB108BQ8NET1 73 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 SLAMF9Q96A28 289 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 TMIGD2Q96BF3 282 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 YIPF6Q96EC8 236 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 ZNF488Q96MN9 340 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 NARFLQ9H6Q4 476 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 SCOCQ9UIL1 159 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 PPIAL4AQ9Y536 164 aa17.87■□□□□ 0.45
CASC4-204ENST00000557945 MEGF11A6BM72 1044 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 VWC2LB2RUY7 222 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 C3orf80F5H4A9 247 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 SPRY1O43609 319 aaPredicted RBP17.86■□□□□ 0.45
CASC4-204ENST00000557945 LHBP01229 141 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 TFAP2AP05549 437 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 TMEM225BP0DP42 221 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 MYL9P24844 172 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 PDZK1IP1Q13113 114 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 ZMYND11Q15326 602 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 LRRTM1Q86UE6 522 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 MKXQ8IYA7 352 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 JAGN1Q8N5M9 183 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 OR13F1Q8NGS4 319 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 FAM192AQ9GZU8 254 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 SNTG1Q9NSN8 517 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 TXNL4BQ9NX01 149 aaKnown RBP17.86■□□□□ 0.45
CASC4-204ENST00000557945 GSTK1Q9Y2Q3 226 aa17.86■□□□□ 0.45
CASC4-204ENST00000557945 SRRM5B3KS81 715 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 RNF223E7ERA6 249 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 LGALS8O00214 317 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 WNT9BO14905 357 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 ANGPTL7O43827 346 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 IGHV2-70P01814 119 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 GLRA1P23415 457 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 TIMM50Q3ZCQ8 353 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 NKAIN3Q8N8D7 197 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 PNLDC1Q8NA58 520 aaKnown RBP17.85■□□□□ 0.45
CASC4-204ENST00000557945 POC1AQ8NBT0 407 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 TNFAIP8L1Q8WVP5 186 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 DNAJB11Q9UBS4 358 aa17.85■□□□□ 0.45
CASC4-204ENST00000557945 IGHV3OR15-7A0A075B7D8 119 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 OOEPA6NGQ2 149 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 PGA5P0DJD9 388 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 ADRA2CP18825 462 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 FGF9P31371 208 aaPredicted RBP17.84■□□□□ 0.45
CASC4-204ENST00000557945 MDH2P40926 338 aaKnown RBP17.84■□□□□ 0.45
CASC4-204ENST00000557945 OR3A4PP47883 348 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 ALDH3B2P48448 385 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 CRIP3Q6Q6R5 217 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 GPR141Q7Z602 305 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 LRRC28Q86X40 367 aaPredicted RBP17.84■□□□□ 0.45
CASC4-204ENST00000557945 OR51F2Q8NH61 342 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 SEH1LQ96EE3 360 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 CEP19Q96LK0 163 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 GAL3ST1Q99999 423 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 REG4Q9BYZ8 158 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 WDR13Q9H1Z4 485 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 MTCH1Q9NZJ7 389 aa17.84■□□□□ 0.45
CASC4-204ENST00000557945 TRAV38-1A0A0B4J264 116 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 IGHV4-61A0A0C4DH41 118 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 TRAPPC2LH3BP13 241 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 AIREO43918 545 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 NXPH2O95156 264 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 USF1P22415 310 aaPredicted RBP17.83■□□□□ 0.45
CASC4-204ENST00000557945 ZP1P60852 638 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 GLT8D1Q68CQ7 371 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 NRIP2Q9BQI9 281 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 FUNDC2Q9BWH2 189 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 ELL3Q9HB65 397 aaPredicted RBP17.83■□□□□ 0.45
CASC4-204ENST00000557945 TMEM165Q9HC07 324 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 SMURF1Q9HCE7 757 aa17.83■□□□□ 0.45
CASC4-204ENST00000557945 AK6Q9Y3D8 172 aaKnown RBP17.83■□□□□ 0.45
CASC4-204ENST00000557945 CREBBPQ92793 2442 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms