RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FAHP16930 419 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-224ENST00000557713 BMXP51813 675 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ROM1Q03395 351 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 APOFQ13790 326 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 PLCXD3Q63HM9 321 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 CALHM1Q8IU99 346 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ADGRG5Q8IZF4 528 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 OR4M1Q8NGD0 313 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 OR2T27Q8NH04 317 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ASB9Q96DX5 294 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 MROQ9BYG7 248 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF702PQ9H963 129 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ENPP5Q9UJA9 477 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF281Q9Y2X9 895 aa12.91□□□□□ -0.34
SCFD1-224ENST00000557713 hCG_1809904A0A1W2PP81 198 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 A0A1W2PPE2 198 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 A0A1W2PR64 198 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 A0A1W2PRV1 198 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 PLXNB1O43157 2135 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF254O75437 659 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 NRASP01111 189 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 CCL3L1P16619 93 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 COX7A1P24310 79 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 GYS2P54840 703 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 DLX6P56179 175 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 LGALS4P56470 323 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 GNGT1P63211 74 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF273Q14593 569 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 FAM189A2Q15884 450 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF684Q5T5D7 378 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
SCFD1-224ENST00000557713 REC114Q7Z4M0 266 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 LHFPL4Q7Z7J7 247 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 ZNF679Q8IYX0 411 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 Q8N2B8 174 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 NRIP2Q9BQI9 281 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 SLC25A19Q9HC21 320 aa12.9□□□□□ -0.34
SCFD1-224ENST00000557713 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
SCFD1-224ENST00000557713 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 GNGT2O14610 69 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
SCFD1-224ENST00000557713 DHRS3O75911 302 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 TTRP02766 147 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 TK1P04183 234 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 T-ENOLP0DO92 83 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 CD28P10747 220 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 PRKACGP22612 351 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 HAAOP46952 286 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 RAB13P51153 203 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 COMMD2Q86X83 199 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 HS3ST5Q8IZT8 346 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 LYG1Q8N1E2 194 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-224ENST00000557713 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 LRGUKQ96M69 825 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 NKX3-1Q99801 234 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-224ENST00000557713 CDCA4Q9BXL8 241 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 C1orf21Q9H246 121 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF556Q9HAH1 456 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 COPS3Q9UNS2 423 aa12.89□□□□□ -0.35
SCFD1-224ENST00000557713 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 A6NDX4 124 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 J3QT63 122 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 DLGAP1O14490 977 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 ANXA8P13928 327 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 HABP2Q14520 560 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF829Q3KNS6 432 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 LDLRAD2Q5SZI1 272 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF782Q6ZMW2 699 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-224ENST00000557713 ASB17Q8WXJ9 295 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 TCF19Q9Y242 345 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 V9GYS6 101 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
SCFD1-224ENST00000557713 A0A1B0GTI1 187 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 AQP12BA6NM10 295 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 ADARB2-AS1A8MUL3 147 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 ODF3BA8MYP8 253 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 FBXO24O75426 580 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms