RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 AGAP6Q5VW22 663 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 SLC25A26Q70HW3 274 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 TRAPPC6BQ86SZ2 158 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF554Q86TJ5 538 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 GLCCI1Q86VQ1 547 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 FJX1Q86VR8 437 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 OSR2Q8N2R0 312 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF611Q8N823 705 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 BHLHE23Q8NDY6 225 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 KLF14Q8TD94 323 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-233ENST00000557529 UPRTQ96BW1 309 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 CCDC120Q96HB5 630 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 MICU1Q9BPX6 476 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 RTL8AQ9BWD3 113 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 CRIM1Q9NZV1 1036 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 MEMO1Q9Y316 297 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 TLN1Q9Y490 2541 aaKnown RBP10.7□□□□□ -0.7
SHMT2-233ENST00000557529 PIEZO2Q9H5I5 2752 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 IGKV1-12A0A0C4DH73 117 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 SERPINE3A8MV23 424 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 M0R1B8 84 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 MFNGO00587 321 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 CA11O75493 328 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 DHFRP00374 187 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 IGKV1D-12P01611 117 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 CRYAAP02489 173 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 KITLGP21583 273 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 CA6P23280 308 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 GCH1P30793 250 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 CA7P43166 264 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 HAAOP46952 286 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF83P51522 516 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 RAG2P55895 527 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 TMEM50BP56557 158 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 ERVS71-1P61550 626 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 FAM27E3Q08E93 113 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF718Q3SXZ3 478 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 MBNL2Q5VZF2 373 aaKnown RBP10.69□□□□□ -0.7
SHMT2-233ENST00000557529 STEAP1BQ6NZ63 245 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 BTN2A1Q7KYR7 527 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 CALHM1Q8IU99 346 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 RELL2Q8NC24 303 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-233ENST00000557529 Q8NFD4 153 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 OR8S1Q8NH09 359 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 ARHGAP5-AS1Q96IT6 56 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 PKIBQ9C010 78 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-233ENST00000557529 IFT46Q9NQC8 304 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 NUDT15Q9NV35 164 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 MCUBQ9NWR8 336 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 HSF4Q9ULV5 492 aa10.69□□□□□ -0.7
SHMT2-233ENST00000557529 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-233ENST00000557529 MED19A0JLT2 244 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF736B4DX44 427 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-233ENST00000557529 PRSS44E7EML9 344 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 LILRA1O75019 489 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 TBPP20226 339 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 GABRR1P24046 479 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 CALCRP30988 508 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 CCR6P51684 374 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 PSG7Q13046 419 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ARFRP1Q13795 201 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 MEF2DQ14814 521 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 TATDN3Q17R31 274 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 TMEM255AQ5JRV8 349 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ELP2Q6IA86 826 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 OR4C16Q8NGL9 310 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 OR56B4Q8NH76 319 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ST8SIA4Q92187 359 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 NEURL2Q9BR09 285 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 PECRQ9BY49 303 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ELF5Q9UKW6 265 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ASPMQ8IZT6 3477 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 MYO7BQ6PIF6 2116 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 ZGRF1Q86YA3 2104 aa10.68□□□□□ -0.7
SHMT2-233ENST00000557529 LRP5LA4QPB2 252 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 TRAPPC2LH3BP13 241 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 H3BUI4 141 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms