RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CHTOPQ9Y3Y2 248 aaKnown RBP4.78□□□□□ -1.64
VPS33B-207ENST00000557470 KPTNQ9Y664 436 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
VPS33B-207ENST00000557470 IGHV3OR15-7A0A075B7D8 119 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 TRAV38-1A0A0B4J264 116 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 TRBV2A0A0J9YWF9 115 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NPIPB5A8MRT5 1133 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 EFCAB9A8MZ26 197 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 XKRYO14609 159 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 CDC42EP2O14613 210 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NPFFO15130 113 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFA2O43678 99 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 XPNPEP2O43895 674 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SLC16A7O60669 478 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 ECDO95905 644 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 RLN1P04808 185 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 CD14P08571 375 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 TMEM225BP0DP42 221 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 AREGP15514 252 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 CA6P23280 308 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 POU1F1P28069 291 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SAA4P35542 130 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 RPL4P36578 427 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SLC9A3P48764 834 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SLC18A1P54219 525 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 MAGOHP61326 146 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 LSM6P62312 80 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 GNGT1P63211 74 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 HIST1H3AP68431 136 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 ELF3P78545 371 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 MRPS15P82914 257 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 IL24Q13007 206 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 KRR1Q13601 381 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NFYCQ13952 458 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 OR8G1Q15617 311 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NSUN5P1Q3KNT7 163 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 KRTAP27-1Q3LI81 207 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 HIST2H3PS2Q5TEC6 136 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 METAP1DQ6UB28 335 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 HIST2H3AQ71DI3 136 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 FAM122BQ7Z309 247 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 CALHM3Q86XJ0 350 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 BATF2Q8N1L9 274 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 PNKDQ8N490 385 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 UXS1Q8NBZ7 420 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 LY6G5BQ8NDX9 201 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 OR4C13Q8NGP0 309 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NPRL2Q8WTW4 380 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SPRYD4Q8WW59 207 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 PRRC1Q96M27 445 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NSMCE2Q96MF7 247 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF570Q96NI8 536 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 COQ7Q99807 217 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 ADAT1Q9BUB4 502 aaKnown RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NUAK2Q9H093 628 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 HDHD2Q9H0R4 259 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 MMP28Q9H239 520 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 SYT4Q9H2B2 425 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 RANGRFQ9HD47 186 aaPredicted RBP4.77□□□□□ -1.65
VPS33B-207ENST00000557470 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 FAM118AQ9NWS6 357 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 C1orf123Q9NWV4 160 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 NKIRAS1Q9NYS0 192 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 FAM30AQ9NZY2 134 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 MBD2Q9UBB5 411 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 RHCGQ9UBD6 479 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 STEAP1Q9UHE8 339 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 U3KQV3 271 aa4.77□□□□□ -1.65
VPS33B-207ENST00000557470 LOC100653049A0A140TA62 436 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 MEIOCA2RUB1 952 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 CD300LBA8K4G0 201 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 NOTOA8MTQ0 251 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 F5H5K5 113 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 H3BUX3 64 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 K7EIL1 84 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 DCTN6O00399 190 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 PSPNO60542 156 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KHDRBS3O75525 346 aaKnown RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KRT34O76011 436 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 FAM107AO95990 144 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KRT8P05787 483 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 ACSM4P0C7M7 580 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 ANOS1P23352 680 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 GPR4P46093 362 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 YAP1P46937 504 aaKnown RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 PRKCDQ05655 676 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 ST3GAL3Q11203 375 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 IL13RA2Q14627 380 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KPNB1Q14974 876 aaKnown RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 LY6EQ16553 131 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 RABL3Q5HYI8 236 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms