RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HAAOP46952 286 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 CAPZA1P52907 286 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 CLVS2Q5SYC1 327 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 SLX4IPQ5VYV7 408 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 ACP7Q6ZNF0 438 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 Q6ZSV7 163 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
SNX6-210ENST00000557341 ZNF573Q86YE8 665 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 GID4Q8IVV7 300 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 PNKDQ8N490 385 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 TCEANCQ8N8B7 351 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 TMEM163Q8TC26 289 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 R4GMQ9 66 aa11.59□□□□□ -0.55
SNX6-210ENST00000557341 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 RFPL4AA6NLU0 287 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 DHRS7CA6NNS2 312 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 RFPL4AL1F8VTS6 287 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 G3V2T6 193 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 SLC1A7O00341 560 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 DLGAP1O14490 977 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 ANGPTL7O43827 346 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 MITFO75030 526 aaPredicted RBP11.58□□□□□ -0.56
SNX6-210ENST00000557341 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 TGFBR2P37173 567 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 DEFA6Q01524 100 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 EGR3Q06889 387 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 ATP6AP1Q15904 470 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 MIDNQ504T8 468 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 AADACL4Q5VUY2 407 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 TMEM42Q69YG0 159 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 C12orf73Q69YU5 71 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 PLEKHG7Q6ZR37 379 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 ZNF561Q8N587 486 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 BEND2Q8NDZ0 799 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 PPP1R14AQ96A00 147 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 APOL4Q9BPW4 351 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 CADM1Q9BY67 442 aaKnown RBP11.58□□□□□ -0.56
SNX6-210ENST00000557341 GABARAPL1Q9H0R8 117 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 MMP27Q9H306 513 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 CLN6Q9NWW5 311 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 OR52A1Q9UKL2 312 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX6-210ENST00000557341 SF3B6Q9Y3B4 125 aaKnown RBP11.58□□□□□ -0.56
SNX6-210ENST00000557341 V9GYS6 101 aa11.58□□□□□ -0.56
SNX6-210ENST00000557341 ANKRD61A6NGH8 418 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 SYNGR1O43759 233 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 TSPAN9O75954 239 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 NXPH2O95156 264 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 EPHA2P29317 976 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 EFNB1P98172 346 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 KDM4DQ6B0I6 523 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 ZDHHC13Q8IUH4 622 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 ELMOD2Q8IZ81 293 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 CD177Q8N6Q3 437 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 OR51G2Q8NGK0 314 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 UBE2FQ969M7 185 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 PLEKHA1Q9HB21 404 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 TCF7L1Q9HCS4 588 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 GPR173Q9NS66 373 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 C19orf12Q9NSK7 152 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
SNX6-210ENST00000557341 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
SNX6-210ENST00000557341 PQLC2LA1A4F0 135 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 H3BUX3 64 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 MAGEB4O15481 346 aaPredicted RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 NOS1APO75052 506 aaPredicted RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 KRT8P05787 483 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 FCGR1AP12314 374 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 MPZP25189 248 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 FASP25445 335 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 CEBPDP49716 269 aaPredicted RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 RASSF2P50749 326 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 RPL31P62899 125 aaKnown RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 HCP5Q6MZN7 132 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 Q6ZSR3 168 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 ASRGL1Q7L266 308 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 OR14K1Q8NGZ2 314 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 IL4I1Q96RQ9 567 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 RBM4BQ9BQ04 359 aaKnown RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 PPA2Q9H2U2 334 aa11.56□□□□□ -0.56
SNX6-210ENST00000557341 WARS2Q9UGM6 360 aaKnown RBP11.56□□□□□ -0.56
SNX6-210ENST00000557341 A0A1B0GTI1 187 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 hCG_1809904A0A1W2PP81 198 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 A0A1W2PPE2 198 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 A0A1W2PR64 198 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 A0A1W2PRV1 198 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 CCL1P22362 96 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 PRDX2P32119 198 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 BNIP1Q12981 228 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
SNX6-210ENST00000557341 C1orf146Q5VVC0 180 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 ASPHD2Q6ICH7 369 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 SSX6Q7RTT6 188 aa11.55□□□□□ -0.56
SNX6-210ENST00000557341 MKXQ8IYA7 352 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms