RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 DLGAP1O14490 977 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 SIGLEC5O15389 551 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 SULT1C4O75897 302 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 NXPH2O95156 264 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
VSX1-207ENST00000557285 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
VSX1-207ENST00000557285 KLRD1Q13241 179 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 TMED1Q13445 227 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 SMIM21Q3B7S5 101 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 TMEM42Q69YG0 159 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 ACP7Q6ZNF0 438 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 POC1AQ8NBT0 407 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 LY6G5BQ8NDX9 201 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 TRUB1Q8WWH5 349 aaKnown RBP13.63□□□□□ -0.23
VSX1-207ENST00000557285 SLC29A1Q99808 456 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 C9orf16Q9BUW7 83 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 DNTTIP1Q9H147 329 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 OR14J1Q9UGF5 321 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
VSX1-207ENST00000557285 A0A0U1RQK1 487 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 HKR1P10072 659 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 CCL1P22362 96 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 OMGP23515 440 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 KIR3DL2P43630 455 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 COMPP49747 757 aaPredicted RBP13.62□□□□□ -0.23
VSX1-207ENST00000557285 SNRPGP62308 76 aaKnown RBP13.62□□□□□ -0.23
VSX1-207ENST00000557285 ZBTB49Q6ZSB9 765 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 FAM185AQ8N0U4 392 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 PQLC1Q8N2U9 271 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 ITFG2Q969R8 447 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 SLC7A11Q9UPY5 501 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 POLDIP2Q9Y2S7 368 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 PCDHGB1Q9Y5G3 927 aa13.62□□□□□ -0.23
VSX1-207ENST00000557285 DHRS7CA6NNS2 312 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 J3QLW9 94 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 GPR37O15354 613 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 PGA5P0DJD9 388 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 ZNF19P17023 458 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 OR12D2P58182 307 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 BPIFB3P59826 476 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 ACTC1P68032 377 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 ACTA1P68133 377 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 FOXL1Q12952 345 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 UBE2V2Q15819 145 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 OCLNQ16625 522 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 MEDAGQ5VYS4 303 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 PNKDQ8N490 385 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 CD177Q8N6Q3 437 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 RASL12Q9NYN1 266 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 ZNF222Q9UK12 451 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 MAB21L2Q9Y586 359 aa13.61□□□□□ -0.23
VSX1-207ENST00000557285 SNTNA6NMZ2 147 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 CLDN34H7C241 214 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 SLC16A6O15403 523 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 MELTFP08582 738 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 UBCP0CG48 685 aaKnown RBP13.6□□□□□ -0.23
VSX1-207ENST00000557285 PRDX2P32119 198 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 CAV3P56539 151 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 FIP1L1Q6UN15 594 aaKnown RBP13.6□□□□□ -0.23
VSX1-207ENST00000557285 Q6YL49 198 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 ENTHD1Q8IYW4 607 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 Q8N7P7 452 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 OR4M1Q8NGD0 313 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 OR2G2Q8NGZ5 317 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 STMN2Q93045 179 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 LGALS12Q96DT0 336 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 C4orf36Q96KX1 117 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 NRIP2Q9BQI9 281 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 CHIAQ9BZP6 476 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 AMBNQ9NP70 447 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
VSX1-207ENST00000557285 FAM181BA6NEQ2 426 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 SLC1A7O00341 560 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 GATBO75879 557 aaKnown RBP13.59□□□□□ -0.23
VSX1-207ENST00000557285 SERPINA3P01011 423 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 HTR1AP08908 422 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 DBTP11182 482 aaKnown RBP13.59□□□□□ -0.23
VSX1-207ENST00000557285 ZNF20P17024 532 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 NANOS3P60323 173 aaKnown RBP13.59□□□□□ -0.23
VSX1-207ENST00000557285 ISL1P61371 349 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 SLC25A30Q5SVS4 291 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 Q6ZSR3 168 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 LHFPL3Q86UP9 236 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 ACBD7Q8N6N7 88 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 KIR3DL3Q8N743 410 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 C8orf46Q8TAG6 207 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 RNF166Q96A37 237 aaPredicted RBP13.59□□□□□ -0.23
VSX1-207ENST00000557285 SDSLQ96GA7 329 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 NOX4Q9NPH5 578 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 C19orf12Q9NSK7 152 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 FRRS1LQ9P0K9 344 aa13.59□□□□□ -0.23
VSX1-207ENST00000557285 IGKV1-27A0A075B6S5 117 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms