RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RAB25P57735 213 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ANKDD1AQ495B1 522 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 GTDC1Q4AE62 458 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ABCA11PQ4W5N1 156 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ALG10Q5BKT4 473 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 FAM76BQ5HYJ3 339 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 MINOS1Q5TGZ0 78 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 C8orf74Q6P047 294 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 C18orf65Q6ZTR6 163 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 MRPL21Q7Z2W9 205 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 DPY19L4Q7Z388 723 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TSEN54Q7Z6J9 526 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 NAA40Q86UY6 237 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF429Q86V71 674 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 SLC15A3Q8IY34 581 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 KIRREL3Q8IZU9 778 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 OR1M1Q8NGA1 313 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 OR13D1Q8NGV5 346 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 OR10Z1Q8NGY1 313 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 OR8U1Q8NH10 309 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 NFKBIDQ8NI38 313 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CHPT1Q8WUD6 406 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 CAPSLQ8WWF8 208 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 IFT81Q8WYA0 676 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 GTF2H4Q92759 462 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 PPP1R36Q96LQ0 422 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 RBM14Q96PK6 669 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 GAFA1Q96PS6 74 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 PRSS27Q9BQR3 290 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ADAT1Q9BUB4 502 aaKnown RBP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TLNRD1Q9H1K6 362 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 TMEM38AQ9H6F2 299 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 DCLRE1BQ9H816 532 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 AIG1Q9NVV5 245 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 USE1Q9NZ43 259 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCFD1-223ENST00000557076 A4GNTQ9UNA3 340 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 ANGPT4Q9Y264 503 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 MINOS1-NBL1R4GNA1 71 aa3.67□□□□□ -1.82
SCFD1-223ENST00000557076 LOC102723971A0A1B0GUV8 181 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 PRSS37A4D1T9 235 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 GGT3PA6NGU5 568 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 OR2AT4A6NND4 320 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 C17orf98A8MV24 154 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 F5H5K5 113 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 M0QX08 132 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 CDIPTO14735 213 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 KHDRBS3O75525 346 aaKnown RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 OR2F2O95006 317 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 LCATP04180 440 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 BPGMP07738 259 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 GPX2P18283 190 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 RPL31P62899 125 aaKnown RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF92Q03936 586 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 SCARB2Q14108 478 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 TIGD6Q17RP2 521 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 GCNT6Q5T4J0 391 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 LCN8Q6JVE9 175 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 CPLX4Q7Z7G2 160 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 DHDDSQ86SQ9 333 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 RBM45Q8IUH3 476 aaKnown RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 NKAIN4Q8IVV8 208 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 SMYD1Q8NB12 490 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 ZNRF1Q8ND25 227 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 OR8S1Q8NH09 359 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 PFN4Q8NHR9 129 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 OSR1Q8TAX0 266 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 TMEM239Q8WW34 195 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 STMN2Q93045 179 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 RNFT2Q96EX2 444 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 SDSLQ96GA7 329 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 DUX3Q96PT4 197 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 CDRT15Q96T59 188 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 PAIP1Q9H074 479 aaKnown RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 WDR13Q9H1Z4 485 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 NMNAT1Q9HAN9 279 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-223ENST00000557076 GRPEL1Q9HAV7 217 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 C19orf12Q9NSK7 152 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 SNTG1Q9NSN8 517 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 ADA2Q9NZK5 511 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 RAP2CQ9Y3L5 183 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 HILPDAQ9Y5L2 63 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 LHFPL6Q9Y693 200 aa3.66□□□□□ -1.82
SCFD1-223ENST00000557076 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.82
SCFD1-223ENST00000557076 IGKV1D-17A0A075B6S4 117 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ANKRD30BLA7E2S9 258 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 CCRL2O00421 344 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 XKRYO14609 159 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ITM2AO43736 263 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SLC16A7O60669 478 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 RBP4P02753 201 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ALPLP05186 524 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 CD14P08571 375 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 IGHV1-8P0DP01 117 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 IDO1P14902 403 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 HOXB9P17482 250 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 PPIBP23284 216 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms