RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FTMTQ8N4E7 242 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 NANOGP1Q8N7R0 232 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 OR51E1Q8TCB6 317 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 FAM216AQ8WUB2 273 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 GATAD2BQ8WXI9 593 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 PIGCQ92535 297 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 RPL3LQ92901 407 aaKnown RBP8.56□□□□□ -1.04
SHMT2-224ENST00000556737 PPP1R14AQ96A00 147 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 MNTQ99583 582 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 MICU1Q9BPX6 476 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 MROQ9BYG7 248 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 MOB1AQ9H8S9 216 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 ABCB9Q9NP78 766 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 GPR84Q9NQS5 396 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 KAAG1Q9UBP8 84 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 GNG8Q9UK08 70 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 GTF2A1LQ9UNN4 478 aa8.56□□□□□ -1.04
SHMT2-224ENST00000556737 PNMA8CA0A1B0GUJ8 204 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 DNAJC9-AS1A6NH13 148 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 NDUFA2O43678 99 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 TFAP2AP05549 437 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 SFTPBP07988 381 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 LIMS3P0CW19 117 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 LIMS4P0CW20 117 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-224ENST00000556737 FAHP16930 419 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 FPR2P25090 351 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 ZNF85Q03923 595 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 EGR3Q06889 387 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 GALEQ14376 348 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 IRF3Q14653 427 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 SPHARQ15513 63 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 TP53I3Q53FA7 332 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 ZNF684Q5T5D7 378 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 XAF1Q6GPH4 301 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 Q6ZSR3 168 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 FAM216BQ8N7L0 139 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 YIPF7Q8N8F6 280 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 SCCPDHQ8NBX0 429 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 OR10Z1Q8NGY1 313 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 MUL1Q969V5 352 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 TMIGD2Q96BF3 282 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 C12orf43Q96C57 262 aaKnown RBP8.55□□□□□ -1.04
SHMT2-224ENST00000556737 FAM71F1Q96KD3 344 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-224ENST00000556737 C4orf36Q96KX1 117 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 OR5M11Q96RB7 305 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 TBX15Q96SF7 602 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 WDR13Q9H1Z4 485 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 BATF3Q9NR55 127 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 CAB39Q9Y376 341 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-224ENST00000556737 R4GMQ9 66 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 V9GYS6 101 aa8.55□□□□□ -1.04
SHMT2-224ENST00000556737 A0A1B0GTI1 187 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 MDFIC2A0A1B0GVS7 189 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 DPPA5A6NC42 116 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TRIM64CA6NLI5 447 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ZNF879B4DU55 563 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 LOC110117498-PIK3R3F6TDL0 507 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 J3QRE1 110 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 DVL1O14640 695 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TMPRSS2O15393 492 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 RHBDL1O75783 438 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 DHRS3O75911 302 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 RPP14O95059 124 aaKnown RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TFF1P04155 84 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 SELLP14151 372 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 CCL1P22362 96 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 MAP2K3P46734 347 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ALDH3B2P48448 385 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 COMPP49747 757 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 GPM6AP51674 278 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 GBX2P52951 348 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 CEACAM21Q3KPI0 293 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 DMRTC1Q5HYR2 192 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 CEP78Q5JTW2 689 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 BCL2L15Q5TBC7 163 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ZBTB37Q5TC79 503 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 UBE2UQ5VVX9 321 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 RNLSQ5VYX0 342 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TMEM42Q69YG0 159 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 COMMD2Q86X83 199 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 CLVS1Q8IUQ0 354 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ELMOD2Q8IZ81 293 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 OR52N1Q8NH53 320 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 UFD1Q92890 307 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ITFG2Q969R8 447 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 RNF170Q96K19 258 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 GAFA1Q96PS6 74 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 CCL13Q99616 98 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 MGLLQ99685 303 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 JAM3Q9BX67 310 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 SIRPDQ9H106 197 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 OR51I2Q9H344 312 aa8.54□□□□□ -1.04
SHMT2-224ENST00000556737 ISG20L2Q9H9L3 353 aaKnown RBP8.54□□□□□ -1.04
SHMT2-224ENST00000556737 TMEM89A2RUT3 159 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms