RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 POTEKPQ9BYX7 375 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ULBP3Q9BZM4 244 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ARRDC1-AS1Q9H2J1 176 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ZBTB20Q9HC78 741 aaPredicted RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 INIPQ9NRY2 104 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 KLRF1Q9NZS2 232 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 CLEC2DQ9UHP7 191 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 FBXL2Q9UKC9 423 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 YARS2Q9Y2Z4 477 aaKnown RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 RALGAPA1Q6GYQ0 2036 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 MPDZO75970 2070 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 IGKV1D-42A0A075B6H8 117 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 IGHV1-45A0A0A0MS14 117 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 NSG1A0A0A6YYJ2 146 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PRG6 482 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 CCDC182A6NF36 153 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 A6NIZ1 184 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FAM183AA6NL82 134 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 E5RGE8 158 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 J3QRE1 110 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 CASKO14936 926 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 NPIPB7O75200 414 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 GPX5O75715 221 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 GATBO75879 557 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 ARL6IP5O75915 188 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ZNF432O94892 652 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SLC2A10O95528 541 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 IGHMP01871 453 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 BGLAPP02818 100 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SERPINE2P07093 398 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 CD59P13987 128 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SPI1P17947 270 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 CELP19835 753 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 MYL9P24844 172 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 CRABP1P29762 137 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 BDKRB2P30411 391 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SDC2P34741 201 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OPRL1P41146 370 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ETV6P41212 452 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 RANBP1P43487 201 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FHITP49789 147 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 DAP3P51398 398 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 SSR4P51571 173 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 DEFA1P59665 94 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 DEFA3P59666 94 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 PLP1P60201 277 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 RAP1BP61224 184 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 RAP1AP62834 184 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ZP4Q12836 540 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ZNF181Q2M3W8 571 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 RGS21Q2M5E4 152 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 NDUFAF6Q330K2 333 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ACSF3Q4G176 576 aaPredicted RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 SMUG1Q53HV7 270 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ELFN2Q5R3F8 820 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 C6orf183Q5T699 404 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 DDI2Q5TDH0 399 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OR2G6Q5TZ20 316 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FAM69BQ5VUD6 431 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 C1orf140Q5VVS0 124 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FAM71F2Q6NXP2 309 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 RPL22L1Q6P5R6 122 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 LEG1Q6P5S2 330 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SHISA6Q6ZSJ9 500 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SHFQ7M4L6 423 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FAM122BQ7Z309 247 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FAM220AQ7Z4H9 259 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SLC35F2Q8IXU6 374 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 MMD2Q8IY49 270 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ARIH2OSQ8N7S6 290 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 LRRC75AQ8NAA5 344 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OR10H4Q8NGA5 316 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OR51L1Q8NGJ5 315 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 OR4K13Q8NH42 304 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 NANPQ8TBE9 248 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FNDC8Q8TC99 324 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 ACOT12Q8WYK0 555 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SLC25A46Q96AG3 418 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 IP6K3Q96PC2 410 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 WDR77Q9BQA1 342 aaPredicted RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 CCDC32Q9BV29 185 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 SPRY4Q9C004 299 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 C6orf62Q9GZU0 229 aaPredicted RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 TXNIPQ9H3M7 391 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 MAP6D1Q9H9H5 199 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 PNRC2Q9NPJ4 139 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 TXNL4BQ9NX01 149 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 MRPL39Q9NYK5 338 aaKnown RBP4.39□□□□□ -1.71
SRP54-211ENST00000556445 TAS2R16Q9NYV7 291 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 NSG2Q9Y328 171 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 UGT2A1Q9Y4X1 527 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 WIF1Q9Y5W5 379 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 FKBP7Q9Y680 259 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 EXPH5Q8NEV8 1989 aa4.39□□□□□ -1.71
SRP54-211ENST00000556445 IGHV3-20A0A0C4DH32 117 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TMEM72A0PK05 275 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms