RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ZNF319Q9P2F9 582 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 ONECUT1Q9UBC0 465 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 FOXJ3Q9UPW0 622 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 SIGLEC9Q9Y336 463 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 CAPN7Q9Y6W3 813 aa7.25□□□□□ -1.25
GTF2A1-204ENST00000556268 TET2Q6N021 2002 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 MEIOCA2RUB1 952 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 ANKRD61A6NGH8 418 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 ANKRD30BLA7E2S9 258 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 ZNF593O00488 134 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 CDIPTO14735 213 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 XRCC2O43543 280 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 ACAA1P09110 424 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 PYCR1P32322 319 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 PRKXP51817 358 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 CAV3P56539 151 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 EMX1Q04741 257 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 TSPAN31Q12999 210 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM189A2Q15884 450 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 DGUOKQ16854 277 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 NCR3LG1Q68D85 454 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 DCXRQ7Z4W1 244 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 ZDHHC21Q8IVQ6 265 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 C11orf42Q8N5U0 333 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM86B1Q8N7N1 296 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 SDR9C7Q8NEX9 313 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 OR4C15Q8NGM1 316 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 OR9Q1Q8NGQ5 310 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 OR2T4Q8NH00 348 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 OR8S1Q8NH09 359 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 GNPDA2Q8TDQ7 276 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 WIPF2Q8TF74 440 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM162AQ96A26 154 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 SLAMF6Q96DU3 332 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 MED30Q96HR3 178 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 PYURFQ96I23 114 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 SSX3Q99909 188 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 NMNAT2Q9BZQ4 307 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 FN3KQ9H479 309 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 RANBP3Q9H6Z4 567 aaPredicted RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 METTL8Q9H825 291 aaKnown RBP7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 FGFR1OP2Q9NVK5 253 aa7.24□□□□□ -1.25
GTF2A1-204ENST00000556268 A0A087WWL8 130 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 A0A1W2PRD5 423 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 A0A1W2PRF3 423 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 A0A1W2PRM7 423 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 TVP23AA6NH52 213 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 PIN1P1O15428 100 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 TUSC2O75896 110 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 GADD45GO95257 159 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SCGB1D2O95969 90 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 PAHP00439 452 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC2A1P11166 492 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SELLP14151 372 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 LMO1P25800 156 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 FMO3P31513 532 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 IFNGR2P38484 337 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 ENTPD1P49961 510 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC25A1P53007 311 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 PSME3P61289 254 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 CSNK2BP67870 215 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SF3A3Q12874 501 aaKnown RBP eCLIP7.23□□□□□ -1.258e-65■■■■□ 26.1
GTF2A1-204ENST00000556268 KLRD1Q13241 179 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 KRT72Q14CN4 511 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 Q8N2B8 174 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 CSNK2A3Q8NEV1 391 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 OR5T2Q8NGG2 359 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 FANK1Q8TC84 345 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 OR5P3Q8WZ94 311 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 DUS3LQ96G46 650 aaKnown RBP7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 KCTD14Q9BQ13 255 aaPredicted RBP7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 COPS4Q9BT78 406 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 NSRP1Q9H0G5 558 aaKnown RBP7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 WDR13Q9H1Z4 485 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SP140LQ9H930 580 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 CENPMQ9NSP4 180 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 NECAP2Q9NVZ3 263 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 DNAJB11Q9UBS4 358 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 SAMD4AQ9UPU9 718 aaKnown RBP7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 RHBDD3Q9Y3P4 386 aa7.23□□□□□ -1.25
GTF2A1-204ENST00000556268 hCG_38984A0A1B0GV85 526 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM90A8PA6NJQ4 464 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 LINC01548A6NM66 108 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 H3BUX3 64 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 SIGLEC5O15389 551 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 XPNPEP2O43895 674 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 CST4P01036 141 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 CFL1P23528 166 aaKnown RBP7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 DCTDP32321 178 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC15A1P46059 708 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 GRB2P62993 217 aaKnown RBP7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 TAF13Q15543 124 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 ZIK1Q3SY52 487 aaPredicted RBP7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 LINC01590Q5TEZ4 76 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 ZNF770Q6IQ21 691 aaPredicted RBP7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 RPL13AP3Q6NVV1 102 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 PGBD2Q6P3X8 592 aa7.22□□□□□ -1.25
GTF2A1-204ENST00000556268 C11orf44Q8N8P7 122 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms