RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HAGHLQ6PII5 290 aaPredicted RBP9.13□□□□□ -0.95
TDP1-211ENST00000555178 SLC25A26Q70HW3 274 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 CCDC190Q86UF4 302 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 SNX29P2Q8IUI4 249 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 CMTM4Q8IZR5 234 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 MUC15Q8N387 334 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ZNF611Q8N823 705 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 OR4M1Q8NGD0 313 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ACOT12Q8WYK0 555 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 FOXRED1Q96CU9 486 aaPredicted RBP9.13□□□□□ -0.95
TDP1-211ENST00000555178 DHRS9Q9BPW9 319 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ELL3Q9HB65 397 aaPredicted RBP9.13□□□□□ -0.95
TDP1-211ENST00000555178 TUBG2Q9NRH3 451 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 DCAF16Q9NXF7 216 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ZNF581Q9P0T4 197 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ING4Q9UNL4 249 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 V9GYH0 126 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ARID1AO14497 2285 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 FAM25AB3EWG3 89 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 FAM25CB3EWG5 89 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 FAM25GB3EWG6 89 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 LDLRAD4O15165 306 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 NDUFS7O75251 213 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 IGHV1-46P01743 117 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 GRPP07492 148 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 SFTPBP07988 381 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 SERPINA2P20848 420 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 NPBWR2P48146 333 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 ATP1B3P54709 279 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 ZNF154Q13106 437 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 PDZK1IP1Q13113 114 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 C11orf71Q6IPW1 123 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 ZNF826PQ6ZT77 177 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 C1orf174Q8IYL3 243 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 PNLDC1Q8NA58 520 aaKnown RBP9.12□□□□□ -0.95
TDP1-211ENST00000555178 OR5A2Q8NGI9 324 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 SLAMF9Q96A28 289 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 DIRAS2Q96HU8 199 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 CEP19Q96LK0 163 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 TECTBQ96PL2 329 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 HIST1H2AAQ96QV6 131 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 NICN1Q9BSH3 213 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 CLEC4MQ9H2X3 399 aaPredicted RBP9.12□□□□□ -0.95
TDP1-211ENST00000555178 RHBDL2Q9NX52 303 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 LAMP3Q9UQV4 416 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 PTHLHP12272 177 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 GMFBP60983 142 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 GNG3P63215 75 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 RIN1Q13671 783 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 ZNF79Q15937 498 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 MOGAT2Q3SYC2 334 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 UBE2NLQ5JXB2 153 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 GCDHQ92947 438 aaPredicted RBP9.12□□□□□ -0.95
TDP1-211ENST00000555178 ITFG2Q969R8 447 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 FBXW5Q969U6 566 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 ELMOD3Q96FG2 381 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 RTL8AQ9BWD3 113 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 OR51I2Q9H344 312 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 UFSP2Q9NUQ7 469 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 EXTL2Q9UBQ6 330 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 CACNG2Q9Y698 323 aa9.12□□□□□ -0.95
TDP1-211ENST00000555178 A0A0A6YYD4 124 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 A0A1B0GWJ7 208 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 PLSCR5A0PG75 271 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 OR5B21A6NL26 309 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 TMEM14DPA8MWL7 114 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CDIPTO14735 213 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CRTAPO75718 401 aaPredicted RBP9.11□□□□□ -0.95
TDP1-211ENST00000555178 BPNT1O95861 308 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 MPIG6BO95866 241 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 BCL3P20749 454 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CDKN1AP38936 164 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 PMELP40967 661 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 ZNF81P51508 661 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CCL8P80075 99 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 TLE4Q04727 773 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 MOGQ16653 247 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 C11orf53Q8IXP5 236 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 SCCPDHQ8NBX0 429 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 OR51F2Q8NH61 342 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 MICU1Q9BPX6 476 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 RBFOX1Q9NWB1 397 aaKnown RBP9.11□□□□□ -0.95
TDP1-211ENST00000555178 MTCH1Q9NZJ7 389 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 CDC14BO60729 498 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 EVX1P49640 407 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 SNU13P55769 128 aaKnown RBP9.11□□□□□ -0.95
TDP1-211ENST00000555178 PDCD1Q15116 288 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 TMEM200AQ86VY9 491 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 LRRC28Q86X40 367 aaPredicted RBP9.11□□□□□ -0.95
TDP1-211ENST00000555178 ITLN1Q8WWA0 313 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 SEH1LQ96EE3 360 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 OR2V2Q96R30 315 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms