RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 GLO1Q04760 184 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 INCA1Q0VD86 236 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TTLL9Q3SXZ7 439 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 CDNFQ49AH0 187 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 OGFRL1Q5TC84 451 aaPredicted RBP3.72□□□□□ -1.81
VRK1-203ENST00000555067 HHATQ5VTY9 493 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 H2AFVQ71UI9 128 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TMEM179BQ7Z7N9 219 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 STX12Q86Y82 276 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 C10orf67Q8IYJ2 551 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 ZFP82Q8N141 532 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 UBAC2Q8NBM4 344 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 ACBD4Q8NC06 268 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 CCDC54Q8NEL0 328 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 NEIL3Q8TAT5 605 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 BLNKQ8WV28 456 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 NELFBQ8WX92 580 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 RBP7Q96R05 134 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TMEM208Q9BTX3 173 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 PAXXQ9BUH6 204 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TMED9Q9BVK6 235 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 CDCA4Q9BXL8 241 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 BCL2L14Q9BZR8 327 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 MFSD1Q9H3U5 465 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TMEM27Q9HBJ8 222 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 UVRAGQ9P2Y5 699 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 RAB22AQ9UL26 194 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 ORC6Q9Y5N6 252 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 A0A087WWV3 80 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 IGKV6D-21A0A0A0MT36 114 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 TRAV8-6A0A0B4J262 113 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 M0R036 132 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 CCRL2O00421 344 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 CXCR6O00574 342 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 ZNF189O75820 626 aaPredicted RBP3.71□□□□□ -1.82
VRK1-203ENST00000555067 ASS1P00966 412 aaKnown RBP3.71□□□□□ -1.82
VRK1-203ENST00000555067 PCCAP05165 728 aaPredicted RBP3.71□□□□□ -1.82
VRK1-203ENST00000555067 CTSLP07711 333 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 TCN2P20062 427 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 CXCR1P25024 350 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 TSPOP30536 169 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 DR1Q01658 176 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 BAXQ07812 192 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 C4orf26Q17RF5 130 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 ACSM3Q53FZ2 586 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 TMEM236Q5W0B7 351 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 DNM1P34Q6PK57 102 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 ARL9Q6T311 187 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 C19orf18Q8NEA5 215 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 MARC2Q969Z3 335 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 METTL26Q96S19 204 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 NRIP2Q9BQI9 281 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 TAPBPLQ9BX59 468 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 SLC25A2Q9BXI2 301 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 UGT2B28Q9BY64 529 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 SPNS1Q9H2V7 528 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 RBM22Q9NW64 420 aaKnown RBP eCLIP3.71□□□□□ -1.827e-6■■■■□ 24.6
VRK1-203ENST00000555067 ZNF226Q9NYT6 803 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 DNAJC27Q9NZQ0 273 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 PCYOX1Q9UHG3 505 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.82
VRK1-203ENST00000555067 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 IGHV1-69DA0A0B4J2H0 117 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 ZNF354AO60765 605 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 UGT2B11O75310 529 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 TRBV12-3P01733 135 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 HSPB1P04792 205 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 TYMSP04818 313 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 CALB1P05937 261 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 BCHEP06276 602 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 PSMB1P20618 241 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 DRD3P35462 400 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 AP2S1P53680 142 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 CDKN2DP55273 166 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 UBE2NP61088 152 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 ERVS71-1P61550 626 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 LSM6P62312 80 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 RSBN1Q5VWQ0 802 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 ZCCHC24Q8N2G6 241 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 RHOXF1Q8NHV9 184 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 ACTRT1Q8TDG2 376 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 HGDQ93099 445 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 NTAN1Q96AB6 310 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 DCPSQ96C86 337 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 PACRGQ96M98 296 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 PLEKHF1Q96S99 279 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 MRPS26Q9BYN8 205 aaKnown RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 SLC25A39Q9BZJ4 359 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 DIABLOQ9NR28 239 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 HEBP1Q9NRV9 189 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 SPANXB1Q9NS25 103 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 FAM49BQ9NUQ9 324 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 IL37Q9NZH6 218 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 SLC22A13Q9Y226 551 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 SIGLEC7Q9Y286 467 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 TRAPPC4Q9Y296 219 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 COL4A4P53420 1690 aaPredicted RBP3.7□□□□□ -1.82
VRK1-203ENST00000555067 VWA8A3KMH1 1905 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms