RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TAAR9Q96RI9 348 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LAT2Q9GZY6 243 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 R4GN57 208 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TRAV39A0A0B4J263 110 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OR5B21A6NL26 309 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 CA6P23280 308 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 RPS27P42677 84 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 SLC48A1Q6P1K1 146 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 MRGPREQ86SM8 312 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 PDPNQ86YL7 162 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 RSG1Q9BU20 258 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF768Q9H5H4 540 aaKnown RBP6.2□□□□□ -1.42
SYNE2-216ENST00000555002 TREX1Q9NSU2 369 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 OCIAD1Q9NX40 245 aa6.2□□□□□ -1.42
SYNE2-216ENST00000555002 LPAR6P43657 344 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 PAFAH1B2P68402 229 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 TRAT1Q6PIZ9 186 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 BHLHA15Q7RTS1 189 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CALHM3Q86XJ0 350 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 BAHD1Q8TBE0 780 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 C1QTNF3Q9BXJ4 246 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 TAAR5O14804 337 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ARG1P05089 322 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 MELTFP08582 738 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CST5P28325 142 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CACNG7P62955 275 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 AGBL4Q5VU57 503 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF547Q8IVP9 402 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SGMS2Q8NHU3 365 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 TM4SF19Q96DZ7 209 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 PACRGQ96M98 296 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 PCED1AQ9H1Q7 454 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 FCN1O00602 326 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ID4P47928 161 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CCR9P51686 369 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CEACAM16Q2WEN9 425 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 RTL10Q7L3V2 364 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 TDHQ8IZJ6 230 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZBTB44Q8NCP5 570 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NEURL2Q9BR09 285 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 KIR3DX1Q9H7L2 352 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NAA60Q9H7X0 242 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 RBFOX1Q9NWB1 397 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 THAP10Q9P2Z0 257 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 FBXL17Q9UF56 701 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 DRGXA6NNA5 263 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 COX6B1P14854 86 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 OSR2Q8N2R0 312 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 OR4C16Q8NGL9 310 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 FAHD2AQ96GK7 314 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 IGHV3OR15-7A0A075B7D8 119 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SEMA7AO75326 666 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 PSMB6P28072 239 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SHBQ15464 509 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 LGALSLQ3ZCW2 172 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 Q6ZN92 141 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF502Q8TBZ5 544 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 GON7Q9BXV9 100 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 AMDHD2Q9Y303 409 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 R4GMQ9 66 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CAPZBP47756 277 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 B2MP61769 119 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 GUK1Q16774 197 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF429Q86V71 674 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 C16orf52Q8NHV5 167 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NPAS1Q99742 590 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 MRPL13Q9BYD1 178 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 GMPR2Q9P2T1 348 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 PLEKHB1Q9UF11 243 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SBK3P0C264 359 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 FECHP22830 423 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SLC17A1Q14916 467 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 RELL2Q8NC24 303 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NIPSNAP1Q9BPW8 284 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SLCO1C1Q9NYB5 712 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 RALYQ9UKM9 306 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 A0A1W2PN81 502 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 VAMP5O95183 116 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZGLP1P0C6A0 271 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 MGMTP16455 207 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 MORN4Q8NDC4 146 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 OR2G2Q8NGZ5 317 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 MRGPRDQ8TDS7 321 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NRG4Q8WWG1 115 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 C19orf43Q9BQ61 176 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 NPAP1Q9NZP6 1156 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 A0A1B0GVG6 124 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 SFTA3P0C7M3 94 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
SYNE2-216ENST00000555002 CSNK1DP48730 415 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 GFRA1P56159 465 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF77Q15935 545 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 ABHD17CQ6PCB6 329 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 EXTL1Q92935 676 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 DERL3Q96Q80 235 aa6.19□□□□□ -1.42
SYNE2-216ENST00000555002 TRDV1A0A1B0GX56 115 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms