RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FLVCR2Q9UPI3 526 aa7.65□□□□□ -1.18
TDP1-210ENST00000554976 FIGNL2A6NMB9 653 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 H2AFB2P0C5Z0 115 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 CBR1P16152 277 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 PTGER4P35408 488 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 ACTBP60709 375 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 ACTG1P63261 375 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 SFRP4Q6FHJ7 346 aaPredicted RBP7.65□□□□□ -1.19
TDP1-210ENST00000554976 CALHM1Q8IU99 346 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 FAM169BQ8N8A8 192 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 OR11H7Q8NGC8 314 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 OR56B2PQ8NGI1 322 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 TNFAIP8L1Q8WVP5 186 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 PECRQ9BY49 303 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 NPTNQ9Y639 398 aa7.65□□□□□ -1.19
TDP1-210ENST00000554976 A0A1B0GUH1 482 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 MKRN2OSH3BPM6 223 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 AKR7A2O43488 359 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 LYZL6O75951 148 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 RBP2P50120 134 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 TAS2R19P59542 299 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 PDZK1IP1Q13113 114 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 TSC22D1Q15714 1073 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 STEAP1BQ6NZ63 245 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ZNF585AQ6P3V2 769 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 Q6ZPA2 131 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ZNF610Q8N9Z0 462 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 PNLDC1Q8NA58 520 aaKnown RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 OR56B1Q8NGI3 324 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ARHGAP5-AS1Q96IT6 56 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ACTR6Q9GZN1 396 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 OPN3Q9H1Y3 402 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 COQ3Q9NZJ6 369 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 PRELID3BQ9Y3B1 194 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ZNF850A8MQ14 1090 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 SPRY1O43609 319 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 CRTAPO75718 401 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 MPIG6BO95866 241 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 HPXP02790 462 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 VSIG10L2P0DP72 767 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 SSTP61278 116 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 PRDX4Q13162 271 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 CEACAM21Q3KPI0 293 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ELP2Q6IA86 826 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ZNF474Q6S9Z5 364 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 GLDNQ6ZMI3 551 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 CXorf67Q86X51 503 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 SAXO1Q8IYX7 474 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 GVQW1Q8N7I0 195 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 ZSCAN4Q8NAM6 433 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 OR13C8Q8NGS7 320 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 OR10K1Q8NGX5 313 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 NUDCD2Q8WVJ2 157 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 OR5P3Q8WZ94 311 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 DVL3Q92997 716 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 RBM14Q96PK6 669 aaKnown RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 GAL3ST1Q99999 423 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 FN3KRPQ9HA64 309 aa7.64□□□□□ -1.19
TDP1-210ENST00000554976 MYOZ1Q9NP98 299 aaPredicted RBP7.64□□□□□ -1.19
TDP1-210ENST00000554976 IL5P05113 134 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 SULT1A3P0DMM9 295 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 SULT1A4P0DMN0 295 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 APLNRP35414 380 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 MTCP1P56278 107 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 ARL6IP6Q8N6S5 226 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 STEAP2Q8NFT2 490 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 EXTL1Q92935 676 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 FYTTD1Q96QD9 318 aaKnown RBP7.63□□□□□ -1.19
TDP1-210ENST00000554976 SELENOIQ9C0D9 397 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 TINAGL1Q9GZM7 467 aaPredicted RBP7.63□□□□□ -1.19
TDP1-210ENST00000554976 CST11Q9H112 138 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 RANGRFQ9HD47 186 aaPredicted RBP7.63□□□□□ -1.19
TDP1-210ENST00000554976 HSF4Q9ULV5 492 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 ING4Q9UNL4 249 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 ATMQ13315 3056 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 G3V3Q6 166 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 PYCARD-AS1I3L0S3 204 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 SFTPBP07988 381 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 GTF2F2P13984 249 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 RAB25P57735 213 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 RBMS2Q15434 407 aaKnown RBP7.63□□□□□ -1.19
TDP1-210ENST00000554976 NHLRC3Q5JS37 347 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 CD276Q5ZPR3 534 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 MOB3CQ70IA8 216 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 WDR86Q86TI4 376 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 CD163Q86VB7 1156 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 OR4S1Q8NGB4 309 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 RAB3CQ96E17 227 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 GPER1Q99527 375 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 SLC6A7Q99884 636 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 IFT46Q9NQC8 304 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 ZNF629Q9UEG4 869 aaPredicted RBP7.63□□□□□ -1.19
TDP1-210ENST00000554976 SLC25A15Q9Y619 301 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 CEP250Q9BV73 2442 aa7.63□□□□□ -1.19
TDP1-210ENST00000554976 FAM230AA0A1W2PPH8 454 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 A0A1W2PR80 420 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CEACAM18A8MTB9 384 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 A8MV72 311 aaPredicted RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 I3L521 148 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms