RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 IFNA8P32881 189 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 DDOSTP39656 456 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 RPS27P42677 84 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ENTPD1P49961 510 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 DYNLT3P51808 116 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OR12D2P58182 307 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 RPL31P62899 125 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 DYNC1I2Q13409 638 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 NFYCQ13952 458 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF273Q14593 569 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TRAM2Q15035 370 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 CYBRD1Q53TN4 286 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 C9orf152Q5JTZ5 239 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TMEM200BQ69YZ2 307 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 EPGNQ6UW88 154 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 DRAM2Q6UX65 266 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 SLC16A9Q7RTY1 509 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OR2W3Q7Z3T1 314 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OFCC1Q8IZS5 231 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 Q8N1X5 172 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OSR2Q8N2R0 312 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 MREGQ8N565 214 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 DPP10Q8N608 796 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 RNF152Q8N8N0 203 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OR4M1Q8NGD0 313 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OR2T27Q8NH04 317 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 NDNFQ8TB73 568 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 BCAS4Q8TDM0 211 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 CAPSLQ8WWF8 208 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 RBMXL1Q96E39 390 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TPD52L3Q96J77 140 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 P2RX4Q99571 388 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 MICU1Q9BPX6 476 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 CHCHD6Q9BRQ6 235 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 COPS4Q9BT78 406 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TMEM109Q9BVC6 243 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 FNDC11Q9BVV2 318 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 NSRP1Q9H0G5 558 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TLNRD1Q9H1K6 362 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OPA3Q9H6K4 179 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 YY1AP1Q9H869 796 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 SP140LQ9H930 580 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 MRPL22Q9NWU5 206 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF222Q9UK12 451 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 RHBDD3Q9Y3P4 386 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 A0A1W2PPH5 198 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 TVP23AA6NH52 213 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ANXA2P2A6NMY6 339 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 FAM90A22PA8MWA6 464 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 SEC14L6B5MCN3 397 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 H3BUI4 141 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 FFAR1O14842 300 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 XRCC2O43543 280 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 PTP4A3O75365 173 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 TXNDC12O95881 172 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 IFNA14P01570 189 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 AMY2AP04746 511 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 PIPP12273 146 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 AZGP1P25311 298 aaKnown RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 GZMMP51124 257 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RPS6KA3P51812 740 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 SLC7A2P52569 658 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 FXYD6P3P58550 94 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 FAM3AP98173 230 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 PMS2P11Q13670 270 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 TAF13Q15543 124 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 TIGD6Q17RP2 521 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 LRRC23Q53EV4 343 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 C9orf66Q5T8R8 295 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF626Q68DY1 528 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF770Q6IQ21 691 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 DPY19L2P2Q6ZN68 376 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 KCTD8Q6ZWB6 473 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 TMPRSS11FQ6ZWK6 438 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 MBOAT2Q6ZWT7 520 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RNF113BQ8IZP6 322 aaKnown RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 LINC00471Q8N535 108 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 CYB561A3Q8NBI2 242 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 OR13D1Q8NGV5 346 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 OR4K13Q8NH42 304 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.24□□□□□ -1.733e-7■■■■■ 71.4
HOXB3-213ENST00000552000 SPSB4Q96A44 273 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ISOC1Q96CN7 298 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 SDSLQ96GA7 329 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 REEP6Q96HR9 211 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RAX2Q96IS3 184 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ERMAPQ96PL5 475 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 GPX7Q96SL4 187 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 NMNAT3Q96T66 252 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 EBF4Q9BQW3 602 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 SLC25A33Q9BSK2 321 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RTL8AQ9BWD3 113 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 FGF23Q9GZV9 251 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 C1orf21Q9H246 121 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms