RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 SGCEO43556 437 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ITM2AO43736 263 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 FMO6PO60774 539 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SERPINI2O75830 405 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 KDM4BO94953 1096 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SLC2A10O95528 541 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HLA-DPB1P04440 258 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 FGF4P08620 206 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR8U9P0C7N5 309 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ADORA3P0DMS8 318 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SELLP14151 372 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ETS2P15036 469 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ACADSP16219 412 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 EFNA1P20827 205 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 MSR1P21757 451 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HTR2AP28223 471 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LAP3P28838 519 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OTX1P32242 354 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CDAP32320 146 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 DAP3P51398 398 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CLNS1AP54105 237 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 UGT2B15P54855 530 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CLDN8P56748 225 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 DNAJB13P59910 316 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LSM6P62312 80 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ESRRGP62508 458 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 RPL38P63173 70 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SLC35B1P78383 322 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 EWSR1Q01844 656 aaKnown RBP eCLIP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF45Q02386 682 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 PRB3Q04118 309 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF616Q08AN1 781 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SCRN3Q0VDG4 424 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 IL18R1Q13478 541 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 AQP6Q13520 282 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 KIAA0141Q14154 515 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 GK2Q14410 553 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CASP8Q14790 479 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 PPP1R7Q15435 360 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SSX2Q16385 188 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SYPL1Q16563 259 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF74Q16587 644 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 DGUOKQ16854 277 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 PNLIPRP3Q17RR3 467 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 RSPO1Q2MKA7 263 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 DEFB136Q30KP8 78 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LGALS9BQ3B8N2 356 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 UGT3A2Q3SY77 523 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 PAPPA-AS1Q5QFB9 102 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 BEND6Q5SZJ8 279 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HHATQ5VTY9 493 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 PRAMEF6Q5VXH4 476 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ATG16L1Q676U5 607 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR2T2Q6IF00 324 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LCN8Q6JVE9 175 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 Q6ZR54 194 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 KRT74Q7RTS7 529 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 TSEN54Q7Z6J9 526 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 WDR86Q86TI4 376 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 NUDCD3Q8IVD9 361 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LAX1Q8IWV1 398 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 KLHL7Q8IXQ5 586 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 MKXQ8IYA7 352 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LRRC34Q8IZ02 419 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR5AS1Q8N127 324 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 C10orf111Q8N326 155 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CADM2Q8N3J6 435 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 STPG2Q8N412 459 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LRRC18Q8N456 261 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ANKFN1Q8N957 763 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CYB561A3Q8NBI2 242 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 BHLHE23Q8NDY6 225 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR9Q1Q8NGQ5 310 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR52P1PQ8NH57 321 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SDSLQ96GA7 329 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 UBE2E2Q96LR5 201 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 C18orf15Q96N68 181 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 GAFA1Q96PS6 74 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 RAB3IPQ96QF0 476 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CCL13Q99616 98 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CHCHD6Q9BRQ6 235 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ALG12Q9BV10 488 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HCAR1Q9BXC0 346 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 GON7Q9BXV9 100 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 TRIM31Q9BZY9 425 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HDHD2Q9H0R4 259 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 OR51J1Q9H342 316 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 TXNIPQ9H3M7 391 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 ARMC7Q9H6L4 198 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SEBOXQ9HB31 216 aaPredicted RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 BCL2L10Q9HD36 194 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 POLE4Q9NR33 117 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 C19orf12Q9NSK7 152 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 LIN7CQ9NUP9 197 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 UFSP2Q9NUQ7 469 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 THUMPD1Q9NXG2 353 aaKnown RBP1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HAO2Q9NYQ3 351 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SIGLEC8Q9NYZ4 499 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 P2RX2Q9UBL9 471 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 SLC25A10Q9UBX3 287 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms