RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CEACAM18A8MTB9 384 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 CD5LO43866 347 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 ALX3O95076 343 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 PLATP00750 562 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 TGFAP01135 160 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 RAB3AP20336 220 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 GLRA1P23415 457 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 EMX1Q04741 257 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 GPR50Q13585 617 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 MICBQ29980 383 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 LIPKQ5VXJ0 399 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 TEX36Q5VZQ5 186 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 CALHM1Q8IU99 346 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 MS4A15Q8N5U1 240 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 LINC01356Q8N9X3 169 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 C1orf159Q96HA4 380 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 OR14A2Q96R54 314 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 TMED9Q9BVK6 235 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 PKIBQ9C010 78 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 WDR13Q9H1Z4 485 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 LPAR2Q9HBW0 351 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 ACOT13Q9NPJ3 140 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 YAE1D1Q9NRH1 226 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 DNAJB11Q9UBS4 358 aa13.58□□□□□ -0.24
CHMP1A-209ENST00000550872 A0A1W2PPK0 400 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 B4DSR2 109 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF879B4DU55 563 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 MAGEB3O15480 346 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 NDUFA2O43678 99 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 INMTO95050 263 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 GYPAP02724 150 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 HCKP08631 526 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 WNT2P09544 360 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 RPS2P15880 293 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF16P17020 682 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 MPZP25189 248 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 POU3F4P49335 361 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 IL24Q13007 206 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 TPBGQ13641 420 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 LYPD2Q6UXB3 125 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 DCDC5Q6ZRR9 648 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF367Q7RTV3 350 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 FAM90A1Q86YD7 464 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 SPARTQ8N0X7 666 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 TMIGD2Q96BF3 282 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF488Q96MN9 340 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 SPACA5Q96QH8 159 aa13.57□□□□□ -0.24
CHMP1A-209ENST00000550872 HIVEP2P31629 2446 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 DOCK11Q5JSL3 2073 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 F5H0A9 414 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 CYB5AP00167 134 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 TGFBR2P37173 567 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 PPP3R1P63098 170 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 KCTD21Q4G0X4 260 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 ACSM3Q53FZ2 586 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 ASPHD2Q6ICH7 369 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF773Q6PK81 442 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 SLC25A26Q70HW3 274 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 NLRC3Q7RTR2 1065 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 OR5T2Q8NGG2 359 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 OR8B3Q8NGG8 313 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 OR51A2Q8NGJ7 313 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 THRSPQ92748 146 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 RFT1Q96AA3 541 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 OR8B2Q96RD0 313 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 SNTG1Q9NSN8 517 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 CKLFQ9UBR5 152 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
CHMP1A-209ENST00000550872 TRBV5-7A0A0A0MS05 114 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 ADAM20O43506 726 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 NOS1APO75052 506 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 NXPH2O95156 264 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 PGA5P0DJD9 388 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 CPEP16870 476 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 CPT2P23786 658 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 MAPK3P27361 379 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 SEC61A1P61619 476 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 ESCO2Q56NI9 601 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 FAM166AQ6J272 317 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 ZNF529Q6P280 563 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 RNF144BQ7Z419 303 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 SATL1Q86VE3 508 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 MKXQ8IYA7 352 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 BATF2Q8N1L9 274 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 OR51F2Q8NH61 342 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 TMEM203Q969S6 136 aa13.55□□□□□ -0.24
CHMP1A-209ENST00000550872 SLAMF9Q96A28 289 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms