RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
CALCOCO1-218ENST00000550804 OR10C1Q96KK4 312 aa12.34□□□□□ -0.43
CALCOCO1-218ENST00000550804 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO1-218ENST00000550804 FAM221AA4D161 298 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 A8MXK9 166 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 B8ZZF3 427 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 CRHP06850 196 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 OPRM1P35372 400 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 HTR5AP47898 357 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 GPR137CQ8N3F9 429 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 BVESQ8NE79 360 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 SIGLEC12Q96PQ1 595 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 LIME1Q9H400 295 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 PFDN2Q9UHV9 154 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 OSGIN2Q9Y236 505 aa12.33□□□□□ -0.44
CALCOCO1-218ENST00000550804 FIGNL2A6NMB9 653 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 F5H0A9 414 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 TSPAN9O75954 239 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR2F2O95006 317 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 ZNF92Q03936 586 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR2F1Q13607 317 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 PXDC1Q5TGL8 231 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 ELP2Q6IA86 826 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 TMEM185AQ8NFB2 350 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR5AP2Q8NGF4 316 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR52H1Q8NGJ2 320 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 FOXB1Q99853 325 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 ACKR4Q9NPB9 350 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 PLA2G3Q9NZ20 509 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 NUP50Q9UKX7 468 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 NCKAP5O14513 1909 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 TERTO14746 1132 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 BCL2L11O43521 198 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 SFT2D2O95562 160 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 SERPINA5P05154 406 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 FGF2P09038 288 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 CCL2P13500 99 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 FOXG1P55316 489 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 RAB35Q15286 201 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 PIGYQ3MUY2 71 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 H3F3CQ6NXT2 135 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 RPUSD3Q6P087 351 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 DRAM2Q6UX65 266 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 Q6ZSR3 168 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 PIP4P1Q86T03 277 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 TM2D1Q9BX74 207 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 WNT5BQ9H1J7 359 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 PPA2Q9H2U2 334 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 GHRLQ9UBU3 117 aa12.32□□□□□ -0.44
CALCOCO1-218ENST00000550804 MSGN1A6NI15 193 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 CEACAM18A8MTB9 384 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 SERPINA7P05543 415 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 HOXD4P09016 255 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 HOXB5P09067 269 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 CST2P09228 141 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 CPT2P23786 658 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 NUBP1P53384 320 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 GFRA1P56159 465 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 RIPPLY1Q0D2K3 151 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 ZNF345Q14585 488 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 PEG10Q86TG7 708 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 PXT1Q8NFP0 134 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 Q96M66 194 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 BARX1Q9HBU1 254 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR5AC2Q9NZP5 309 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 A0A096LPE4 126 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 A0A1W2PPZ6 126 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR6C6A6NF89 314 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 NEURL1O76050 574 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 TNFSF15O95150 251 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 SFTPBP07988 381 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 RSU1Q15404 277 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 TMEM200AQ86VY9 491 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 ZNF2Q9BSG1 426 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
CALCOCO1-218ENST00000550804 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms