RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 SLC1A7O00341 560 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 NOS1APO75052 506 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-218ENST00000550771 DHRS3O75911 302 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 PGA5P0DJD9 388 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 FAHP16930 419 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 CALB2P22676 271 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 PRDX2P32119 198 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 APOFQ13790 326 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF829Q3KNS6 432 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF684Q5T5D7 378 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF573Q86YE8 665 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF679Q8IYX0 411 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 C11orf44Q8N8P7 122 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 PIFOQ8TCI5 191 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 ASB17Q8WXJ9 295 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 CCDC124Q96CT7 223 aaKnown RBP16.76■□□□□ 0.27
CACNB3-218ENST00000550771 OR8B4Q96RC9 309 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 TEAD3Q99594 435 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 SLC25A19Q9HC21 320 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 PIGLQ9Y2B2 252 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 TMEM14AQ9Y6G1 99 aa16.76■□□□□ 0.27
CACNB3-218ENST00000550771 AQP12BA6NM10 295 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 VGLL3A8MV65 326 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 J3QT63 122 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 CHST1O43916 411 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 E2F6O75461 281 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 NRASP01111 189 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 ANXA8P13928 327 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 PAX6P26367 422 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 LGALS4P56470 323 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 ERVFRD-1P60508 538 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 LCN1P1Q5VSP4 162 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 CALHM1Q8IU99 346 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 AQP12AQ8IXF9 295 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 CANT1Q8WVQ1 401 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 CDCA4Q9BXL8 241 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 POLDIP2Q9Y2S7 368 aa16.75■□□□□ 0.27
CACNB3-218ENST00000550771 MEGF11A6BM72 1044 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 FAM90A8PA6NJQ4 464 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 SYNGR1O43759 233 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 COX7A1P24310 79 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 HAAOP46952 286 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 BMXP51813 675 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 RIDAP52758 137 aaKnown RBP16.74■□□□□ 0.27
CACNB3-218ENST00000550771 GYS2P54840 703 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 TMEM236Q5W0B7 351 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 TMEM42Q69YG0 159 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 REC114Q7Z4M0 266 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 HS3ST5Q8IZT8 346 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 OR4M1Q8NGD0 313 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 OR2T27Q8NH04 317 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF488Q96MN9 340 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 NRIP2Q9BQI9 281 aa16.74■□□□□ 0.27
CACNB3-218ENST00000550771 CCDC182A6NF36 153 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 PRR32B1ATL7 298 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 DLGAP1O14490 977 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 TTRP02766 147 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 VSIG10L2P0DP72 767 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 CCL3L1P16619 93 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 SNAPC1Q16533 368 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 CLVS2Q5SYC1 327 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 Q8N2B8 174 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 C1orf21Q9H246 121 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 MOB1AQ9H8S9 216 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 HES4Q9HCC6 221 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 COPS3Q9UNS2 423 aa16.73■□□□□ 0.27
CACNB3-218ENST00000550771 PQLC2LA1A4F0 135 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 NXPH2O95156 264 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 TK1P04183 234 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 MRPL3P09001 348 aaKnown RBP16.72■□□□□ 0.27
CACNB3-218ENST00000550771 T-ENOLP0DO92 83 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 PRKACGP22612 351 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 MFGE8Q08431 387 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF273Q14593 569 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 HIST2H2BDQ6DRA6 164 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 DNAJC9Q8WXX5 260 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 PPP1R14AQ96A00 147 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF702PQ9H963 129 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 TVP23BQ9NYZ1 205 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 IKZF2Q9UKS7 526 aa16.72■□□□□ 0.27
CACNB3-218ENST00000550771 C17orf98A8MV24 154 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 SRSF10O75494 262 aaKnown RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 MPZP25189 248 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 CEBPDP49716 269 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 DLX6P56179 175 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 EMX1Q04741 257 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 FAM189A2Q15884 450 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 LHFPL4Q7Z7J7 247 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 FOXRED1Q96CU9 486 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 NKX3-1Q99801 234 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 SERTAD4Q9NUC0 356 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 TCF19Q9Y242 345 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 ZNF281Q9Y2X9 895 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 TBL2Q9Y4P3 447 aaKnown RBP16.71■□□□□ 0.27
CACNB3-218ENST00000550771 V9GYS6 101 aa16.71■□□□□ 0.27
CACNB3-218ENST00000550771 PLXNB1O43157 2135 aa16.7■□□□□ 0.26
CACNB3-218ENST00000550771 DHRS7CA6NNS2 312 aa16.7■□□□□ 0.26
CACNB3-218ENST00000550771 LOC110117498-PIK3R3F6TDL0 507 aa16.7■□□□□ 0.26
CACNB3-218ENST00000550771 K7N7A8 449 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms