RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 BMFQ96LC9 184 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 OR2A5Q96R48 311 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 LXNQ9BS40 222 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 SLC25A2Q9BXI2 301 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 ING2Q9H160 280 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 MED4Q9NPJ6 270 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 C20orf96Q9NUD7 363 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-205ENST00000550592 OR12D3Q9UGF7 316 aa3.03□□□□□ -1.92
LIMA1-205ENST00000550592 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 A0A0D9SFI3 127 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 A0A1B0GVX0 72 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 TLCD2A6NGC4 264 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ERICH4A6NGS2 130 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ARGFXA6NJG6 315 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 SMKR1H3BMG3 65 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 PIRO00625 290 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CASQ2O14958 399 aaPredicted RBP3.02□□□□□ -1.93
LIMA1-205ENST00000550592 SCAMP2O15127 329 aaKnown RBP3.02□□□□□ -1.93
LIMA1-205ENST00000550592 SLC31A1O15431 190 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 FKBP6O75344 327 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 SPAG7O75391 227 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ANXA8P13928 327 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 NAMPTP43490 491 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CSNK1A1P48729 337 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CRISP1P54107 249 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 EIF3EP60228 445 aaKnown RBP3.02□□□□□ -1.93
LIMA1-205ENST00000550592 MAB21L1Q13394 359 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 TRAM2Q15035 370 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ELOCQ15369 112 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 PTPN20Q4JDL3 420 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CT45A1Q5HYN5 189 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ANXA8L1Q5VT79 327 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 UBE2UQ5VVX9 321 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 TMEM215Q68D42 235 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 OR52W1Q6IF63 320 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 DNAJC24Q6P3W2 148 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ZFP2Q6ZN57 461 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 FAM86B1Q8N7N1 296 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ACBD4Q8NC06 268 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CT45A3Q8NHU0 189 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CCDC12Q8WUD4 166 aaPredicted RBP3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CCDC127Q96BQ5 260 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 ZNF681Q96N22 645 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 NTN4Q9HB63 628 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 DYSFO75923 2080 aa3.02□□□□□ -1.93
LIMA1-205ENST00000550592 CUBNO60494 3623 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 IGLV1-36A0A0B4J1U3 117 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 IGHV5-10-1A0A0J9YXX1 117 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 KBTBD11-OT1A0A1B0GTJ5 212 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 SHOX2O60902 331 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 DNAJB6O75190 326 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 AQP8O94778 261 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 GABARAPO95166 117 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 LYPLA2O95372 231 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 CLTAP09496 248 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 CXCL8P10145 99 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 ZNF823P16415 610 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 WARSP23381 471 aaKnown RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 F8A1P23610 371 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 LONP1P36776 959 aaKnown RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 PSMD8P48556 350 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 LRRC63Q05C16 580 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 ERCC8Q13216 396 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 DEFB113Q30KQ7 82 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 C16orf87Q6PH81 154 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 ARL9Q6T311 187 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 NPSR1Q6W5P4 371 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 FBXW12Q6X9E4 464 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 CD302Q8IX05 232 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 FDCSPQ8NFU4 85 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 NUBPLQ8TB37 319 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 DDI1Q8WTU0 396 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 EEF1AKMT3Q96AZ1 226 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 ECHDC3Q96DC8 303 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 GALNT14Q96FL9 552 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 RMND5BQ96G75 393 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 PRRC1Q96M27 445 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 NUDT9Q9BW91 350 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 IQCGQ9H095 443 aaKnown RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 VCXQ9H320 206 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 LRTM1Q9HBL6 345 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 UVRAGQ9P2Y5 699 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 CLN8Q9UBY8 286 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 CAB39Q9Y376 341 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-205ENST00000550592 ARID1AO14497 2285 aa3.01□□□□□ -1.93
LIMA1-205ENST00000550592 SCN1AP35498 2009 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 LRP4O75096 1905 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 KCNE1BA0A087WTH5 132 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 AIREO43918 545 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 CCNB2O95067 398 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 FGFR1OPO95684 399 aaKnown RBP3□□□□□ -1.93
LIMA1-205ENST00000550592 HLA-DPB1P04440 258 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 BCHEP06276 602 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 OR8G3PP0DMU2 310 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 CTSEP14091 401 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms