RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TEX12Q9BXU0 123 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 MEGF9Q9H1U4 602 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 MMP28Q9H239 520 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 OR51V1Q9H2C8 321 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 NIPAL2Q9H841 368 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 REEP1Q9H902 201 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 S100A14Q9HCY8 104 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 ABCB10Q9NRK6 738 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 CMC2Q9NRP2 79 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 ARMC1Q9NVT9 282 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 RASL12Q9NYN1 266 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 NDUFA13Q9P0J0 144 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 FOXJ3Q9UPW0 622 aa6.89□□□□□ -1.31
TROAP-208ENST00000548817 ZNF732B4DXR9 585 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 PRR23D1E9PI22 279 aaPredicted RBP6.88□□□□□ -1.31
TROAP-208ENST00000548817 FBXO24O75426 580 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 SOX14O95416 240 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 PRR23D2P0DMB1 279 aaPredicted RBP6.88□□□□□ -1.31
TROAP-208ENST00000548817 PSG2P11465 335 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 IGLL1P15814 213 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 FAHP16930 419 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 AMY2BP19961 511 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 MICAQ29983 383 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 SMIM21Q3B7S5 101 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 KLHL12Q53G59 568 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 FAM76BQ5HYJ3 339 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 KRT77Q7Z794 578 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 ZNRF1Q8ND25 227 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 OR4Q3Q8NH05 313 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 ITFG2Q969R8 447 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
TROAP-208ENST00000548817 DGCR6LQ9BY27 220 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 GPR61Q9BZJ8 451 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 MED20Q9H944 212 aa6.88□□□□□ -1.31
TROAP-208ENST00000548817 SAMHD1Q9Y3Z3 626 aaKnown RBP6.88□□□□□ -1.31
TROAP-208ENST00000548817 A6NHS1 94 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ACOD1A6NK06 481 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR5B21A6NL26 309 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 FAM183AA6NL82 134 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 TFF1P04155 84 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ALDOBP05062 364 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 HMGN1P05114 100 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ATP6V1B1P15313 513 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 COX7A1P24310 79 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ACKR3P25106 362 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 RPS7P62081 194 aaKnown RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 RPL31P62899 125 aaKnown RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 SLC35A2P78381 396 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 RIPPLY1Q0D2K3 151 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 PPP1R8Q12972 351 aaKnown RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 MED21Q13503 144 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 CEACAM21Q3KPI0 293 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 FAM98BQ52LJ0 330 aaKnown RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 LINC01590Q5TEZ4 76 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 PLCXD3Q63HM9 321 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR2T5Q6IEZ7 315 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ZNF770Q6IQ21 691 aaPredicted RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 KCTD18Q6PI47 426 aaPredicted RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 MOB3CQ70IA8 216 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 PRSS45Q7RTY3 260 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 MKXQ8IYA7 352 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 DEFB107AQ8IZN7 70 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR5A2Q8NGI9 324 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR2T29Q8NH02 315 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR2T27Q8NH04 317 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OR5K1Q8NHB7 308 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 OTOSQ8NHW6 89 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 DPF1Q92782 380 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 FOXRED1Q96CU9 486 aaPredicted RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 SDSLQ96GA7 329 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 LRGUKQ96M69 825 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 MAGIXQ9H6Y5 334 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ELL3Q9HB65 397 aaPredicted RBP6.87□□□□□ -1.31
TROAP-208ENST00000548817 USE1Q9NZ43 259 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ACTR3BQ9P1U1 418 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 ZNF319Q9P2F9 582 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 LAMP5Q9UJQ1 280 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 PITPNC1Q9UKF7 332 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.87□□□□□ -1.31
TROAP-208ENST00000548817 LRP12Q9Y561 859 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 U3KQV3 271 aa6.87□□□□□ -1.31
TROAP-208ENST00000548817 IGKV1D-17A0A075B6S4 117 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 RFPL4AA6NLU0 287 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 RFPL4AL1F8VTS6 287 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 GNGT2O14610 69 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 MTRF1O75570 445 aaKnown RBP6.86□□□□□ -1.31
TROAP-208ENST00000548817 RHBDL1O75783 438 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 NXPH2O95156 264 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 PRDX2P32119 198 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 BMXP51813 675 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 KRTAP10-11P60412 298 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 PSMA6P60900 246 aaKnown RBP6.86□□□□□ -1.31
TROAP-208ENST00000548817 GK3PQ14409 553 aa6.86□□□□□ -1.31
TROAP-208ENST00000548817 PLA1AQ53H76 456 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms