RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 RASL12Q9NYN1 266 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 SLC22A31A6NKX4 558 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 H3BUX3 64 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 J3QT63 122 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 SYNGR1O43759 233 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 PGA5P0DJD9 388 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 TGFBR2P37173 567 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 CXCR4P61073 352 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF684Q5T5D7 378 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF322Q6U7Q0 402 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 OR5D13Q8NGL4 314 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 PRRG3Q9BZD7 231 aa14.18□□□□□ -0.14
CHMP1A-205ENST00000548650 PQLC2LA1A4F0 135 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 RFPL4AA6NLU0 287 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 LOC110117498-PIK3R3F6TDL0 507 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 RFPL4AL1F8VTS6 287 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 H0YAE9 185 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 MAGEB4O15481 346 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 GSC2O15499 205 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 ANGPTL7O43827 346 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 MITFO75030 526 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 DNAJC8O75937 253 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 NRASP01111 189 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 EPHA2P29317 976 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 HAAOP46952 286 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 CEBPDP49716 269 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 CAPZA1P52907 286 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 ESRRGP62508 458 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 EFNB1P98172 346 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 EGR3Q06889 387 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 CLVS2Q5SYC1 327 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 BCL2L15Q5TBC7 163 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 AADACL4Q5VUY2 407 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 SLX4IPQ5VYV7 408 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 NXNL2Q5VZ03 156 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 PLEKHG7Q6ZR37 379 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 MEPCEQ7L2J0 689 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 SLC35F2Q8IXU6 374 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 OR5K1Q8NHB7 308 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 UBE2FQ969M7 185 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 APOL4Q9BPW4 351 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 NRIP2Q9BQI9 281 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 PPA2Q9H2U2 334 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 GTF2A1LQ9UNN4 478 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 R4GMQ9 66 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 V9GYS6 101 aa14.17□□□□□ -0.14
CHMP1A-205ENST00000548650 A0A1B0GTI1 187 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 ZAR1LA6NP61 321 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 NOS1APO75052 506 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 MPZP25189 248 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 C12orf73Q69YU5 71 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 Q6ZSR3 168 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF573Q86YE8 665 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 MKXQ8IYA7 352 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 ELMOD2Q8IZ81 293 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF561Q8N587 486 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 C11orf42Q8N5U0 333 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 TCEANCQ8N8B7 351 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 OR14K1Q8NGZ2 314 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 TMEM163Q8TC26 289 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 MNTQ99583 582 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 HES4Q9HCC6 221 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 GPR173Q9NS66 373 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 KRT84Q9NSB2 600 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 MRM2Q9UI43 246 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 OR52A1Q9UKL2 312 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 POLDIP2Q9Y2S7 368 aa14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 SF3B6Q9Y3B4 125 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-205ENST00000548650 ANKRD61A6NGH8 418 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 SLC1A7O00341 560 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 DLGAP1O14490 977 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 RPL31P62899 125 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF273Q14593 569 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 ATP6AP1Q15904 470 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 LRRC75BQ2VPJ9 315 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 SLC35E4Q6ICL7 350 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 OR51G2Q8NGK0 314 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 PPP1R35Q8TAP8 253 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 RORBQ92753 470 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 CADM1Q9BY67 442 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 CLN6Q9NWW5 311 aa14.15□□□□□ -0.14
CHMP1A-205ENST00000548650 MEGF11A6BM72 1044 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 DHRS7CA6NNS2 312 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 ZNF670-ZNF695F2Z2N8 137 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 NXPH2O95156 264 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 CCL3L1P16619 93 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 CCL1P22362 96 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 PAX6P26367 422 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 GABRA5P31644 462 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 PRDX2P32119 198 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 AANATQ16613 207 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 C2orf68Q2NKX9 166 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 TMEM200BQ69YZ2 307 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 CRIP3Q6Q6R5 217 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 SSX6Q7RTT6 188 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 CALHM1Q8IU99 346 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 BATF2Q8N1L9 274 aa14.14□□□□□ -0.15
CHMP1A-205ENST00000548650 SSX3Q99909 188 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms