RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 C1orf174Q8IYL3 243 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 UBE2J2Q8N2K1 259 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 ZNF283Q8N7M2 679 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 WDR31Q8NA23 367 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 OR5T1Q8NG75 326 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 PP6455Q8WZ26 134 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 TNFRSF14Q92956 283 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SOSTQ9BQB4 213 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SLC30A2Q9BRI3 323 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 BARX1Q9HBU1 254 aaPredicted RBP7.26□□□□□ -1.25
VPS29-203ENST00000546588 ELOVL5Q9NYP7 299 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SLC23A1Q9UHI7 598 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 NUP50Q9UKX7 468 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 DHDHQ9UQ10 334 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 AMDHD2Q9Y303 409 aa7.26□□□□□ -1.25
VPS29-203ENST00000546588 SVILO95425 2214 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 TRAV8-7A0A075B6U6 113 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 OR5H1A6NKK0 313 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 IFITM5A6NNB3 132 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ZNHIT1O43257 154 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 SYT7O43581 403 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 RAB3DO95716 219 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 DHFRP00374 187 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 HLA-HP01893 362 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 CALCBP10092 127 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ATF1P18846 271 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 STOMP27105 288 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 THBS4P35443 961 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 MNDAP41218 407 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 HTR5AP47898 357 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 GZMKP49863 264 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ZNF81P51508 661 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 BMXP51813 675 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ZNF45Q02386 682 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 TAF13Q15543 124 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 C1orf100Q5SVJ3 147 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 DDI2Q5TDH0 399 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 TMEM211Q6ICI0 200 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 CRIP3Q6Q6R5 217 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 ZNF474Q6S9Z5 364 aaPredicted RBP7.25□□□□□ -1.25
VPS29-203ENST00000546588 RDH10Q8IZV5 341 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 OR1J2Q8NGS2 313 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 AKR7LQ8NHP1 331 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 LHFPL5Q8TAF8 219 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 OR51E1Q8TCB6 317 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 PTX4Q96A99 478 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 APOBEC3DQ96AK3 386 aaPredicted RBP7.25□□□□□ -1.25
VPS29-203ENST00000546588 TECTBQ96PL2 329 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 CHST5Q9GZS9 411 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 SLITRK2Q9H156 845 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 MIXL1Q9H2W2 232 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 HMG20AQ9NP66 347 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 GPR84Q9NQS5 396 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 TINAGQ9UJW2 476 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 SLC45A2Q9UMX9 530 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 MEMO1Q9Y316 297 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 SLC25A15Q9Y619 301 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 V9GY05 133 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 V9GYH0 126 aa7.25□□□□□ -1.25
VPS29-203ENST00000546588 CHD3Q12873 2000 aaKnown RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 A0A1B0GVI7 797 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 CLDN25C9JDP6 229 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ATP6V1G2-DDX39BF2Z307 99 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 M0QYG6 137 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 WRBO00258 174 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 P2RY10O00398 339 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 SLC17A2O00624 439 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 LDLRAD4O15165 306 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 GRPP07492 148 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ZNF35P13682 527 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 PRF1P14222 555 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 CCKARP32238 428 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 PRKXP51817 358 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 UCP3P55916 312 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 OR10A3P58181 314 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 LINC00310P59036 64 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 SPCS3P61009 180 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 PPP3R1P63098 170 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 DCTN2Q13561 401 aaKnown RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 HIKESHIQ53FT3 197 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 PET117Q6UWS5 81 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 FBXW12Q6X9E4 464 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 NAA40Q86UY6 237 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 MDP1Q86V88 176 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 LRRC28Q86X40 367 aaPredicted RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 CMTM4Q8IZR5 234 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 OR5AS1Q8N127 324 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 CNEP1R1Q8N9A8 125 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 RELL2Q8NC24 303 aaPredicted RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 OR6M1Q8NGM8 313 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 OR13C3Q8NGS6 347 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 TSEN15Q8WW01 171 aaKnown RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 SLC7A6Q92536 515 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 AKAP1Q92667 903 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS29-203ENST00000546588 DPF1Q92782 380 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 PHF21AQ96BD5 680 aa7.24□□□□□ -1.25
VPS29-203ENST00000546588 ADAT3Q96EY9 351 aaPredicted RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 OPN3Q9H1Y3 402 aaPredicted RBP7.24□□□□□ -1.25
VPS29-203ENST00000546588 ABCG5Q9H222 651 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms