RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF610Q8N9Z0 462 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 NOXO1Q8NFA2 376 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 TM2D1Q9BX74 207 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 PLEKHJ1Q9NW61 149 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 GFOD1Q9NXC2 390 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 COL5A1P20908 1838 aaPredicted RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 A0A1W2PNV4 684 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 LIPT2A6NK58 231 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 RAMP1O60894 148 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 LY86O95711 162 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 IGHG1P01857 330 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 OR5H8P0DN80 308 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 ALDH3B1P43353 468 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 NHLH2Q02577 135 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 FOXF1Q12946 379 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 IL13RA2Q14627 380 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 TMEM187Q14656 261 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 CDPF1Q6NVV7 123 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 FBXW12Q6X9E4 464 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 UEVLDQ8IX04 471 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 ZNF441Q8N8Z8 693 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 SLC38A9Q8NBW4 561 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 GALNT14Q96FL9 552 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 LIN37Q96GY3 246 aaPredicted RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 HDHD3Q9BSH5 251 aaPredicted RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 LRRC61Q9BV99 259 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 UNC80Q8N2C7 3258 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 CDH23Q9H251 3354 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 TCRBV21S2A2A0A5A6 115 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 VSTM2BA6NLU5 285 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 ZNF727A8MUV8 499 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 H7C1Q1 480 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 ADAM10O14672 748 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 GPR37O15354 613 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 FCGR2AP12318 317 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 DUSP1P28562 367 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 TAGLN2P37802 199 aaKnown RBP12.44□□□□□ -0.42
SRP54-202ENST00000546080 EIF3IQ13347 325 aaKnown RBP12.44□□□□□ -0.42
SRP54-202ENST00000546080 HIKESHIQ53FT3 197 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 CARD17Q5XLA6 110 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 FBXO46Q6PJ61 603 aaPredicted RBP12.44□□□□□ -0.42
SRP54-202ENST00000546080 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 LYZL2Q7Z4W2 148 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 PGAM5Q96HS1 289 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 DECR2Q9NUI1 292 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 ANXA10Q9UJ72 324 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 ZDHHC8Q9ULC8 765 aa12.44□□□□□ -0.42
SRP54-202ENST00000546080 RBFOX3A6NFN3 312 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 TLCD2A6NGC4 264 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 SHISA8B8ZZ34 492 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 H3BQ15 152 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 ST8SIA3O43173 380 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 IGHV4-34P06331 123 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 PGA4P0DJD7 388 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 PGA3P0DJD8 388 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 ZNF728P0DKX0 622 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 BLKP51451 505 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 CEBPGP53567 150 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 UBE2KP61086 200 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 MFAP5Q13361 173 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 OGFOD3Q6PK18 319 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 APCDD1LQ8NCL9 501 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 OR10D4PQ8NGN7 298 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 RTN4IP1Q8WWV3 396 aaPredicted RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 RAB39BQ96DA2 213 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 ZNF850A8MQ14 1090 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 SEC14L6B5MCN3 397 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 ZNF43P17038 809 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 CTHP32929 405 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 GRB2P62993 217 aaKnown RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 C17orf67Q0P5P2 114 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 CRIP3Q6Q6R5 217 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 SLC16A14Q7RTX9 510 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 PHOSPHO2Q8TCD6 241 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 Q8WTZ3 238 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 MARS2Q96GW9 593 aaKnown RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 SUCNR1Q9BXA5 334 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 DUSP15Q9H1R2 295 aaPredicted RBP12.43□□□□□ -0.42
SRP54-202ENST00000546080 CERS4Q9HA82 394 aa12.43□□□□□ -0.42
SRP54-202ENST00000546080 DOCK8Q8NF50 2099 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 FBLP22087 321 aaKnown RBP12.42□□□□□ -0.42
SRP54-202ENST00000546080 ELOBQ15370 118 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 C16orf47Q6ZP98 133 aaPredicted RBP12.42□□□□□ -0.42
SRP54-202ENST00000546080 LIAT1Q6ZQX7 453 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 S100PBPQ96BU1 408 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 REEP6Q96HR9 211 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms