RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KISS1Q15726 138 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 IAH1Q2TAA2 248 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PLPPR5Q32ZL2 321 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ANKRD55Q3KP44 614 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PLAC9Q5JTB6 97 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 HIST2H3PS2Q5TEC6 136 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 RHBDD2Q6NTF9 364 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 DHRS11Q6UWP2 260 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PLXDC2Q6UX71 529 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 DPPA3Q6W0C5 159 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ASCL4Q6XD76 172 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 SPRED2Q7Z698 418 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF761Q86XN6 746 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 LINC00346Q8IVM7 164 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PRR22Q8IZ63 422 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 LRRC18Q8N456 261 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CCDC71LQ8N9Z2 235 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 SLC38A9Q8NBW4 561 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 NFAM1Q8NET5 270 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR8B12Q8NGG6 310 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR51T1Q8NGJ9 327 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR10S1Q8NGN2 331 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR1L3Q8NH93 324 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR51E1Q8TCB6 317 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 STT3BQ8TCJ2 826 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 RXFP4Q8TDU9 374 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 LMX1AQ8TE12 382 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 SPTSSAQ969W0 71 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CMBLQ96DG6 245 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ARHGAP5-AS1Q96IT6 56 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 SPIN2AQ99865 258 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 SPIN2BQ9BPZ2 258 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 GINS3Q9BRX5 216 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PECRQ9BY49 303 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 RTN4RQ9BZR6 473 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OR11A1Q9GZK7 315 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF768Q9H5H4 540 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PTGES2Q9H7Z7 377 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZMAT4Q9H898 229 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZMAT3Q9HA38 289 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 GPR84Q9NQS5 396 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 NECAP2Q9NVZ3 263 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 EHFQ9NZC4 300 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 IL36GQ9NZH8 169 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 B3GAT1Q9P2W7 334 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZMAT5Q9UDW3 170 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CACFD1Q9UGQ2 172 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 DUSP13Q9UII6 198 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CD207Q9UJ71 328 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 TMED3Q9Y3Q3 217 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 TICRRQ7Z2Z1 1910 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM131Q92545 1883 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 IGHV1OR21-1A0A087WYE8 117 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 A0A0A6YYD4 124 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A10PA6NDY2 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A18PA6NE21 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 CXorf65A6NEN9 183 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A16PA6NEW6 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 C5orf52A6NGY3 159 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A20PA6NIJ5 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A8PA6NJQ4 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A7PA6NKC0 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A22PA8MWA6 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A12PA8MX19 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A5PA8MXJ8 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A23PA8MXZ1 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 H3BS24 57 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 TP53I11O14683 189 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SOCS1O15524 211 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZFAND5O76080 213 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 MPZL1O95297 269 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 CDS2O95674 445 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 IFNA17P01571 189 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 MBPP02686 304 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A15PP0C7V4 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A13PP0C7W8 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A14PP0C7W9 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FAM90A24PP0C7X0 464 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SPP1P10451 314 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 HLA-DOBP13765 273 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF43P17038 809 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 DUSP1P28562 367 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 BLVRBP30043 206 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FCGR2CP31995 323 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SNCAP37840 140 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 NPBWR1P48145 328 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 GFERP55789 205 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 STARD6P59095 220 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FMODQ06828 376 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FOXF1Q12946 379 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 MYBPHQ13203 477 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SRSF5Q13243 272 aaKnown RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF266Q14584 549 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SLC9A3R2Q15599 337 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 EIF2S3LQ2VIR3 472 aaKnown RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM88Q6PEY1 159 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 Q6ZS49 121 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ANKRD37Q7Z713 158 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 COMMD2Q86X83 199 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms